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bioconductor-gcapc

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GC Aware Peak Caller

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-gcapc

Usage Tracking

1.30.0
1.26.0
1.24.0
1.22.0
1.18.0
5 / 8 versions selected
Total downloads: 0

Description

Peak calling for ChIP-seq data with consideration of potential GC bias in sequencing reads. GC bias is first estimated with generalized linear mixture models using effective GC strategy, then applied into peak significance estimation.

About

Summary

GC Aware Peak Caller

Information Last Updated

Apr 22, 2025 at 15:29

License

GPL-3

Total Downloads

21.2K

Platforms

noarch Version: 1.30.0