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bioconda / packages / bioconductor-bsgenome.tguttata.ucsc.taegut1.masked

Full genome sequences for Taeniopygia guttata (Zebra finch) as provided by UCSC (taeGut1, Jul. 2008) and stored in Biostrings objects. The sequences are the same as in BSgenome.Tguttata.UCSC.taeGut1, except that each of them has the 2 following masks on top: (1) the mask of assembly gaps (AGAPS mask), and (2) the mask of intra-contig ambiguities (AMB mask). Both masks are "active" by default.

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Type Size Name Uploaded Downloads Labels
conda 9.3 kB | noarch/bioconductor-bsgenome.tguttata.ucsc.taegut1.masked-1.3.99-r43hdfd78af_12.tar.bz2  10 months and 16 days ago 665 main
conda 9.1 kB | noarch/bioconductor-bsgenome.tguttata.ucsc.taegut1.masked-1.3.99-r43hdfd78af_11.tar.bz2  1 year and 3 months ago 358 main
conda 8.6 kB | noarch/bioconductor-bsgenome.tguttata.ucsc.taegut1.masked-1.3.99-r42hdfd78af_10.tar.bz2  1 year and 11 months ago 575 main
conda 9.0 kB | noarch/bioconductor-bsgenome.tguttata.ucsc.taegut1.masked-1.3.99-r41hdfd78af_9.tar.bz2  2 years and 1 month ago 190 main
conda 8.1 kB | noarch/bioconductor-bsgenome.tguttata.ucsc.taegut1.masked-1.3.99-r41hdfd78af_8.tar.bz2  2 years and 11 months ago 678 main
conda 8.1 kB | noarch/bioconductor-bsgenome.tguttata.ucsc.taegut1.masked-1.3.99-r41hdfd78af_7.tar.bz2  3 years and 4 months ago 272 main
conda 7.9 kB | noarch/bioconductor-bsgenome.tguttata.ucsc.taegut1.masked-1.3.99-r40hdfd78af_6.tar.bz2  3 years and 6 months ago 146 main
conda 7.6 kB | noarch/bioconductor-bsgenome.tguttata.ucsc.taegut1.masked-1.3.99-r40_5.tar.bz2  3 years and 11 months ago 152 main
conda 7.5 kB | noarch/bioconductor-bsgenome.tguttata.ucsc.taegut1.masked-1.3.99-r40_4.tar.bz2  4 years and 5 months ago 173 main
conda 7.1 kB | noarch/bioconductor-bsgenome.tguttata.ucsc.taegut1.masked-1.3.99-r36_3.tar.bz2  4 years and 11 months ago 196 main
conda 7.0 kB | noarch/bioconductor-bsgenome.tguttata.ucsc.taegut1.masked-1.3.99-r36_2.tar.bz2  5 years and 2 months ago 201 main
conda 6.5 kB | noarch/bioconductor-bsgenome.tguttata.ucsc.taegut1.masked-1.3.99-r351_0.tar.bz2  5 years and 10 months ago 243 main gcc7
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