| Package Name | Access | Summary | Updated |
|---|---|---|---|
| bedops | public | No Summary | 2025-03-25 |
| parallel | public | Shell tool for executing jobs in parallel | 2025-03-25 |
| gawk | public | GNU implementation of the awk text processing language | 2025-03-25 |
| primer3 | public | Widely used program for designing PCR primers | 2025-03-25 |
| splazers | public | Tool for split mapping of sequencing reads | 2025-03-25 |
| mrbayes | public | Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models | 2025-03-25 |
| libtool | public | Generic library support script that hides the complexity of using shared libraries behind a consistent, portable interface. | 2025-03-25 |
| freebayes | public | No Summary | 2025-03-25 |
| beagle-lib | public | General purpose library for evaluating the likelihood of sequence evolution on trees | 2025-03-25 |
| automake | public | Tool for automatically generating `Makefile.in` files compliant with the GNU Coding Standards | 2025-03-25 |
| autoconf | public | No Summary | 2025-03-25 |
| snpsift | public | No Summary | 2025-03-25 |
| snpeff | public | No Summary | 2025-03-25 |
| tassel | public | No Summary | 2025-03-25 |
| lofreq_star | public | Fast, sensitive variant-caller for inferring SNVs and indels from NGS data | 2025-03-25 |
| scalpel | public | micro-assembly pipeline for detecting indels in NGS data | 2025-03-25 |
| perl-tie-cache | public | LRU Cache in Memory | 2025-03-25 |
| perl-text-nsp | public | Extract collocations and Ngrams from text | 2025-03-25 |
| perl-parallel-forkmanager | public | A simple parallel processing fork manager | 2025-03-25 |
| perl-mldbm-sync | public | safe concurrent access to MLDBM databases | 2025-03-25 |
| pindel | public | Detect breakpoints of structural variants at single-based resolution from NGS data | 2025-03-25 |
| breakdancer | public | Package that provides genome-wide detection of structural variants from NGS paired-end reads | 2025-03-25 |
| perl-gdgraph-histogram | public | Histogram plotting module for Perl5 | 2025-03-25 |
| perl-set-intervaltree | public | Perform range-based lookups on sets of ranges. | 2025-03-25 |
| star-fusion | public | Tool for identifying candidate fusion transcripts supported by Illumina reads | 2025-03-25 |
