| blastpy3 | 0.3.0 | Lightweight High level Python 3 API for NCBI BLAST | Mar 25, 2025 | GNU General Public v3 (GPLv3) |
| nanocount | 1.0.0.post2 | NanoCount estimates transcripts abundance from Oxford Nanopore *direct-RNA sequencing* datasets, using an expectation-maximization approach like RSEM, Kallisto, salmon, etc to handle the uncertainty of multi-mapping reads | Mar 25, 2025 | MIT |
| pybiotools | 0.2.11 | pyBioTools is a collection of python tools to manipulate biological sequences | Mar 25, 2025 | GPLv3 |
| pycometh | 0.4.25 | DNA methylation analysis for Oxford Nanopore DNA sequencing datasets downstream to Nanopolish | Mar 25, 2025 | GPL |
| pycoqc | 2.5.2 | PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data | Mar 25, 2025 | GPLv3 |
| pycosnake | 0.2.6 | pycoSnake is a neatly wrapped collection of snakemake workflows for analysing Illumina and nanopore sequencing datasets. It is easy to install with conda and simple to run on a local computer or in a cluster environment | Mar 25, 2025 | MIT |
| versipy | 0.2.4 | Versatile version and medatada managment across the python packaging ecosystem with git integration | Mar 25, 2025 | GPLv3 |
