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akode / packages / stanity 0.1.4

Helper library for working with Stan models in Python

Installers

  • osx-64 v0.1.4

conda install

To install this package run one of the following:
conda install akode::stanity

Description

.. image:: https://travis-ci.org/hammerlab/stanity.svg :target: https://travis-ci.org/hammerlab/stanity :alt: build status .. image:: https://coveralls.io/repos/github/hammerlab/stanity/badge.svg?branch=master :target: https://coveralls.io/github/hammerlab/stanity :alt: coverage .. image:: https://badge.fury.io/py/stanity.svg :target: https://badge.fury.io/py/stanity

stanity

python convenience functions for working with Stan models (via pystan)

Functionality:

stanity.fit thin wrapper around pystan.stan that caches compiled models stanity.psisloo thin wrapper around psisloo (implemented in https://github.com/avehtari/PSIS/blob/master/py/psis.py) stanity.loo_compare compare model fit using PSIS-LOO, similar to methods implemented in the R package loo

Installation

Install from pip:

::

pip install stanity

::

Or, from a git checkout, run:

::

pip install .

To run the tests:

::

nosetests

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