| Package Name | Access | Summary | Updated |
|---|---|---|---|
| biolib | public | Biolib is a python package for common tasks in bioinformatic. | 2025-03-25 |
| alignment_pruner.pl | public | No Summary | 2025-03-25 |
| bmge | public | BMGE (Block Mapping and Gathering with Entropy) is a program that selects regions in a multiple sequence alignment that are suited for phylogenetic inference. | 2025-03-25 |
| gtdbtk-dev | public | A toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes. | 2025-03-25 |
| genetreetk | public | A toolbox for working with gene trees. | 2025-03-25 |
| comparem | public | A toolbox for comparative genomics. | 2025-03-25 |
| tax2tree | public | Automated taxonomy decoration onto a tree | 2025-03-25 |
| gtdbncbi | public | No Summary | 2025-03-25 |
| pfam_search | public | pfam_scan meets hmmsearch. | 2025-03-25 |
| gtdb_validation_tk | public | This toolkit provides functionality for validation the GTDB Taxonomy. It is primarily intended to be used by the GTDB curation team, but has been made available in case others find it useful. | 2025-03-25 |
| gtdb_species_clusters | public | This toolkit provides functionality for establishing, updating, and validating the species clusters used in the Genome Taxonomy Database. | 2025-03-25 |
| gtdb_migration_tk | public | Toolkit for updating the GTDB to the next release and test data. | 2025-03-25 |
| genometk | public | No Summary | 2025-03-25 |
| genometreetk | public | The genome tree toolkit is a collection of methods for working with genome trees. | 2025-03-25 |
| gtdb_release_tk | public | No Summary | 2025-03-25 |
