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CGR-lab / packages / r-metagmisc 0.6.0.9000

Miscellaneous functions for metagenomic analysis

Installers

  • linux-64 v0.6.0.9000

conda install

To install this package run one of the following:
conda install cgr-lab::r-metagmisc

Description

This package contains miscellaneous functions for metagenomic analysis, including data transformations, several parsers (for USEARCH UC-format; BLAST, SINA and STAMPA outputs, etc.), taxonomy handlers (SILVA, QIIME, AMPTk), phyloseq-shortcuts (multiple rarefaction, phyloseq splitting and exporting), and DADA2-shortcuts (error rate estimation on the subset of data, export of denoised amplicons in fasta).


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