tttpob
by tttpob
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Packages
| Name | Latest Version | Summary | Updated | License |
|---|
| cellphonedb | 5.0.1 | Inferring cell-cell communication. | Mar 25, 2025 | MIT |
| ktplotspy | 0.2.4 | Python library for plotting Cellphonedb results. Ported from ktplots R package. | Mar 25, 2025 | MIT |
| napari-spatialdata | 0.5.7 | Interactive visualization of spatial omics data with napari | Sep 18, 2025 | BSD-3-Clause |
| perl-interpolation | 0.74 | Arbitrary string interpolation semantics (using tie()) | May 9, 2025 | GPL-1.0-or-later OR Artistic-1.0-Perl |
| perl-switch-plain | 0.0501 | A simple switch statement for Perl | May 9, 2025 | GPL-1.0-or-later OR Artistic-1.0-Perl |
| plinkio | 0.9.7 | A library for parsing plink genotype files | Mar 25, 2025 | BSD |
| python-circos | 0.3.0 | Python library for drawing Circos plots using Matplotlib | Mar 25, 2025 | GPL-3.0-or-later |
| r-archr | 1.0.2.20240226 | ArchR is a full-featured R package for processing and analyzing single-cell ATAC-seq data. ArchR provides the most extensive suite of scATAC-seq analysis tools of any software available. Additionally, ArchR excels in both speed and resource usage, making it possible to analyze 1 million cells in 8 hours on a MacBook Pro laptop. | Mar 25, 2025 | MIT |
| r-caspercnv | 2.0.20210405 | CaSpER is published in Nature Communications: https://www.nature.com/articles/s41467-019-13779-x | Mar 25, 2025 | — |
| r-misha | 3.7.1 | Toolkit for analysis of genomic data | Mar 25, 2025 | GPL-2 |
| r-unigd | 0.1.3 | Universal Graphics Device | Aug 18, 2025 | GPL-2.0-or-later |
| r-upsetr | 1.4.0 | A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets | Mar 25, 2025 | MIT |
| r-vscdebugger | 0.5.2 | This package provides support for the VS Code extension R Debugger. | Mar 25, 2025 | MIT |
| regvelo | 0.3.0 | Estimation of RNA velocity with variational inference. | Aug 21, 2025 | BSD-3-Clause |
| scgpt | 0.1.9 | Large-scale generative pretrain of single cell using transformer. | Mar 25, 2025 | MIT |
| scib | 1.1.4 | Evaluating single-cell data integration methods | Mar 25, 2025 | MIT |
| scvelo | 0.3.2 | RNA velocity generalized through dynamical modeling | Mar 25, 2025 | BSD-3-Clause |
| squidpy | 1.6.1 | Spatial Single Cell Analysis in Python | Mar 25, 2025 | BSD-3-Clause |
| torchode | 1.0.0 | A parallel ODE solver for PyTorch | Aug 21, 2025 | — |
| torchtyping | 0.1.5 | Runtime type annotations for the shape, dtype etc. of PyTorch Tensors. | Aug 21, 2025 | Apache-2.0 |