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Bayesian Gene Heritability Analysis from GWAS summary statistics.

Installers

  • linux-64 v2.2.0
  • linux-32 v2.1.11
  • osx-64 v2.2.0
  • linux-aarch64 v2.1.7
  • linux-armv6l v2.1.7
  • linux-armv7l v2.1.7
  • linux-ppc64le v2.1.7
  • win-32 v2.1.7
  • win-64 v2.1.7
  • osx-arm64 v2.1.11

conda install

To install this package run one of the following:
conda install stracquadaniolab::baghera

Description

The Bayesian Gene Heritability Analysis software (BAGHERA) estimates the contribution to the heritability of a trait/disease of all the SNPs in the genome (genome-wide heritability) and those nearby protein-coding genes (gene-level heritability). BAGHERA requires only summary statistics from a Genome-wide Association Study (GWAS), LD scores calculated from a population matching the ethnicity of the GWAS study and a gene annotation file in GTF format.


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