speleo3
by Thomas Holder
Bioinformatics scientist and molecular modeler at Leukocare. Former PyMOL developer at Schrödinger.
by Thomas Holder
Bioinformatics scientist and molecular modeler at Leukocare. Former PyMOL developer at Schrödinger.
| Ranking | Name | Version |
|---|
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| Name | Latest Version | Summary | Updated | License |
|---|
| survex | 1.4.19 | cave surveying and mapping software | Jan 9, 2026 | GPL-2 |
| therion | 6.2.1 | cave surveying and mapping software | Mar 25, 2025 | GPL-2 |
| libjpeg-turbo | 3.0.0 | IJG JPEG compliant runtime library with SIMD and other optimizations | Mar 25, 2025 | IJG AND BSD-3-Clause AND Zlib |
| wxwidgets | 3.2.4 | Cross-Platform GUI Library | Mar 25, 2025 | LicenseRef-wxWindows |
| tmalign | 20170708 | TM-align sequence-order independent protein structure alignment | Jun 19, 2025 | BSD-like |
| pymol-psico | 4.4.0 | — | Feb 19, 2026 | BSD-2-Clause |
| dssp | 2.0.4 | Secondary structure assignment | Mar 25, 2025 | Boost |
| csb | 1.2.5 | Computational Structural Biology Toolbox | Mar 25, 2025 | MIT License |
| leap-motion-python | 2.3.1+31549 | Leap Motion SDK (Python modules only) | Mar 25, 2025 | Proprietary |
| reduce | 3.16.111118 | Reduce Software for Adding Hydrogens | Mar 25, 2025 | RLab |
| indigo | 1.3.0beta | Universal cheminformatics library (Python wrapper) | Mar 25, 2025 | GPL3 |
| aggrescan3d | 1.1.1+speleo3 | Aggrescan3D - protein aggregation analysis standalone application | Feb 19, 2026 | MIT |
| probe | 2.13.110909 | Probe Software for Contact Analysis | Mar 25, 2025 | RLab |
| prekin | 6.51.081122 | Prekin Software for Making Kinemages | Mar 25, 2025 | RLab |
| flipkin | 2.4.010719 | Decide the best flip state for ASP, GLU, HIS | Mar 25, 2025 | RLab |
| msms | 2.6.1 | MSMS is a program written in the C programming language to compute molecular surfaces. | Mar 25, 2025 | Free for academic use. |
| pyqt-hellogl | 5.6 | PyQt OpenGL Hello World program | Mar 25, 2025 | Commercial, GPL-2.0, GPL-3.0 |
| simplemmtf-python | 1.0 | — | Mar 25, 2025 | BSD-3-Clause |