sagrudd
by sagrudd
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To install packages from this channel, use the channel temporarily with conda or add it to your .condarc file for configured ongoing access. Learn more
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Packages
| Name | Latest Version | Summary | Updated | License |
|---|
| amos | 3.1.0 | A Modular, Open-Source whole genome assembler - with conda fixes | Mar 25, 2025 | Artistic License |
| nanopore-r-basicqc | 0.1.1 | Collection of R-packages as required by Nanopore BasicQC tutorial | Mar 25, 2025 | — |
| nanopore-r-cdna-deseq2 | 0.3.1 | Collection of R-packages as required by Nanopore cDNA expression profiling using DESeq2 | Mar 25, 2025 | MPL-2.0 |
| ont_tutorial_cas9 | 0.0.1 | R packages required by the Oxford Nanopore Technologies ont_tutorial_cas9 tutorial for analysis of Cas-mediated PCR-free enrichment sequence data | Mar 25, 2025 | MPL-2.0 |
| pinfish | 200316 | Pinfish is a collection of tools to help make sense of long-read transcriptomics data (long cDNA reads, direct RNA reads). This package has been implemented for ease of installation for Nanopore tutorial workflows. | Mar 25, 2025 | MPL-2.0 |
| r-session | 1.0.3 | Utility functions for interacting with R processes from external programs. This package includes functions to save and restore session information (including loaded packages, and attached data objects), as well as functions to evaluate strings containing R commands and return the printed results or an execution transcript. | Mar 25, 2025 | GPL (>= 2) |
| racon | 1.3.2 | Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. This conda install removes the toolchain_cxx dependencies and thus has a less demanding expectation for CPU capabilities - should install more broadly than the bioconda version ... | Mar 25, 2025 | MIT |