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rdonnellyr / packages

Package Name Access Summary Updated
r-mgcv public Generalized additive (mixed) models, some of their extensions and other generalized ridge regression with multiple smoothing parameter estimation by (Restricted) Marginal Likelihood, Generalized Cross Validation and similar. Includes a gam() function, a wide variety of smoothers, JAGS support and distributions beyond the exponential family. 2023-06-16
r-units public Support for measurement units in R vectors, matrices and arrays: automatic propagation, conversion, derivation and simplification of units; raising errors in case of unit incompatibility. Compatible with the POSIXct, Date and difftime classes. Uses the UNIDATA udunits library and unit database for unit compatibility checking and conversion. 2023-06-16
r-readxl public Import excel files into R. Supports '.xls' via the embedded 'libxls' C library <https://github.com/evanmiller/libxls> and '.xlsx' via the embedded 'RapidXML' C++ library <https://rapidxml.sourceforge.net>. Works on Windows, Mac and Linux without external dependencies. 2023-06-16
r-broom public Summarizes key information about statistical objects in tidy tibbles. This makes it easy to report results, create plots and consistently work with large numbers of models at once. Broom provides three verbs that each provide different types of information about a model. tidy() summarizes information about model components such as coefficients of a regression. glance() reports information about an entire model, such as goodness of fit measures like AIC and BIC. augment() adds information about individual observations to a dataset, such as fitted values or influence measures. 2023-06-16
r-xts public Provide for uniform handling of R's different time-based data classes by extending zoo, maximizing native format information preservation and allowing for user level customization and extension, while simplifying cross-class interoperability. 2023-06-16
r-stanheaders public The C++ header files of the Stan project are provided by this package, but it contains no R code, vignettes, or function documentation. There is a shared object containing part of the 'CVODES' library, but it is not accessible from R. 'StanHeaders' is only useful for developers who want to utilize the 'LinkingTo' directive of their package's DESCRIPTION file to build on the Stan library without incurring unnecessary dependencies. The Stan project develops a probabilistic programming language that implements full or approximate Bayesian statistical inference via Markov Chain Monte Carlo or 'variational' methods and implements (optionally penalized) maximum likelihood estimation via optimization. The Stan library includes an advanced automatic differentiation scheme, 'templated' statistical and linear algebra functions that can handle the automatically 'differentiable' scalar types (and doubles, 'ints', etc.), and a parser for the Stan language. The 'rstan' package provides user-facing R functions to parse, compile, test, estimate, and analyze Stan models. 2023-06-16
r-rio public Streamlined data import and export by making assumptions that the user is probably willing to make: 'import()' and 'export()' determine the data structure from the file extension, reasonable defaults are used for data import and export (e.g., 'stringsAsFactors=FALSE'), web-based import is natively supported (including from SSL/HTTPS), compressed files can be read directly without explicit decompression, and fast import packages are used where appropriate. An additional convenience function, 'convert()', provides a simple method for converting between file types. 2023-06-16
r-mongolite public High-performance 'MongoDB' client based on 'libmongoc' and 'jsonlite'. Includes support for aggregation, indexing, map-reduce, streaming, encryption, enterprise authentication. The online user manual provides an overview of the available methods in the package: <https://jeroen.github.io/mongolite/>. 2023-06-16
r-diagrammer public Build graph/network structures using functions for stepwise addition and deletion of nodes and edges. Work with data available in tables for bulk addition of nodes, edges, and associated metadata. Use graph selections and traversals to apply changes to specific nodes or edges. A wide selection of graph algorithms allow for the analysis of graphs. Visualize the graphs and take advantage of any aesthetic properties assigned to nodes and edges. 2023-06-16
r-matrix public A rich hierarchy of matrix classes, including triangular, symmetric, and diagonal matrices, both dense and sparse and with pattern, logical and numeric entries. Numerous methods for and operations on these matrices, using 'LAPACK' and 'SuiteSparse' libraries. 2023-06-16
r-forecast public Methods and tools for displaying and analysing univariate time series forecasts including exponential smoothing via state space models and automatic ARIMA modelling. 2023-06-16
r-pbdzmq public 'ZeroMQ' is a well-known library for high-performance asynchronous messaging in scalable, distributed applications. This package provides high level R wrapper functions to easily utilize 'ZeroMQ'. We mainly focus on interactive client/server programming frameworks. For convenience, a minimal 'ZeroMQ' library (4.2.2) is shipped with 'pbdZMQ', which can be used if no system installation of 'ZeroMQ' is available. A few wrapper functions compatible with 'rzmq' are also provided. 2023-06-16
r-lmertest public Provides p-values in type I, II or III anova and summary tables for lmer model fits (cf. lme4) via Satterthwaite's degrees of freedom method. A Kenward-Roger method is also available via the pbkrtest package. Model selection methods include step, drop1 and anova-like tables for random effects (ranova). Methods for Least-Square means (LS-means) and tests of linear contrasts of fixed effects are also available. 2023-06-16
r-geometry public Makes the qhull library (www.qhull.org) available in R, in a similar manner as in Octave and MATLAB. Qhull computes convex hulls, Delaunay triangulations, halfspace intersections about a point, Voronoi diagrams, furthest-site Delaunay triangulations, and furthest-site Voronoi diagrams. It runs in 2-d, 3-d, 4-d, and higher dimensions. It implements the Quickhull algorithm for computing the convex hull. Qhull does not support constrained Delaunay triangulations, or mesh generation of non-convex objects, but the package does include some R functions that allow for this. Currently the package only gives access to Delaunay triangulation and convex hull computation. 2023-06-16
r-dt public Data objects in R can be rendered as HTML tables using the JavaScript library 'DataTables' (typically via R Markdown or Shiny). The 'DataTables' library has been included in this R package. The package name 'DT' is an abbreviation of 'DataTables'. 2023-06-16
r-cardata public Datasets to Accompany J. Fox and S. Weisberg, An R Companion to Applied Regression, Third Edition, Sage (forthcoming). 2023-06-16
r-sp public Classes and methods for spatial data; the classes document where the spatial location information resides, for 2D or 3D data. Utility functions are provided, e.g. for plotting data as maps, spatial selection, as well as methods for retrieving coordinates, for subsetting, print, summary, etc. 2023-06-16
r-tilegramsr public R spatial objects for Tilegrams. Tilegrams are tiled maps where the region size is proportional to the certain characteristics of the dataset. 2023-06-16
r-tm public A framework for text mining applications within R. 2023-06-16
r-readr public The goal of 'readr' is to provide a fast and friendly way to read rectangular data (like 'csv', 'tsv', and 'fwf'). It is designed to flexibly parse many types of data found in the wild, while still cleanly failing when data unexpectedly changes. 2023-06-16
r-nnet public Software for feed-forward neural networks with a single hidden layer, and for multinomial log-linear models. 2023-06-16
r-nloptr public nloptr is an R interface to NLopt. NLopt is a free/open-source library for nonlinear optimization, providing a common interface for a number of different free optimization routines available online as well as original implementations of various other algorithms. See http://ab-initio.mit.edu/wiki/index.php/NLopt_Introduction for more information on the available algorithms. During installation on Unix the NLopt code is downloaded and compiled from the NLopt website. 2023-06-16
r-htmltools public Tools for HTML generation and output. 2023-06-16
r-xtable public Coerce data to LaTeX and HTML tables. 2023-06-16
r-rvest public Wrappers around the 'xml2' and 'httr' packages to make it easy to download, then manipulate, HTML and XML. 2023-06-16
r-rjdbc public The RJDBC package is an implementation of R's DBI interface using JDBC as a back-end. This allows R to connect to any DBMS that has a JDBC driver. 2023-06-16
r-rematch public A small wrapper on 'regexpr' to extract the matches and captured groups from the match of a regular expression to a character vector. 2023-06-16
r-rcolorbrewer public Provides color schemes for maps (and other graphics) designed by Cynthia Brewer as described at http://colorbrewer2.org 2023-06-16
r-knitr public Provides a general-purpose tool for dynamic report generation in R using Literate Programming techniques. 2023-06-16
r-gridbase public Integration of base and grid graphics 2023-06-16
r-microbenchmark public Provides infrastructure to accurately measure and compare the execution time of R expressions. 2023-06-16
r-uuid public Tools for generating and handling of UUIDs (Universally Unique Identifiers). 2023-06-16
r-rook public This package contains the Rook specification and convenience software for building and running Rook applications. To get started, be sure and read the 'Rook' help file first. 2023-06-16
r-raster public Reading, writing, manipulating, analyzing and modeling of gridded spatial data. The package implements basic and high-level functions. Processing of very large files is supported. 2023-06-16
r-mime public Guesses the MIME type from a filename extension using the data derived from /etc/mime.types in UNIX-type systems. 2023-06-16
r-dimred public A collection of dimensionality reduction techniques from R packages and provides a common interface for calling the methods. 2023-06-16
r-testit public Provides two convenience functions assert() and test_pkg() to facilitate testing R packages. 2023-06-16
r-miniui public Provides UI widget and layout functions for writing Shiny apps that work well on small screens. 2023-06-16
r-labeling public Provides a range of axis labeling algorithms 2023-06-16
r-downloader public Provides a wrapper for the download.file function, making it possible to download files over HTTPS on Windows, Mac OS X, and other Unix-like platforms. The 'RCurl' package provides this functionality (and much more) but can be difficult to install because it must be compiled with external dependencies. This package has no external dependencies, so it is much easier to install. 2023-06-16
r-codetools public Code analysis tools for R. 2023-06-16
r-vars public Estimation, lag selection, diagnostic testing, forecasting, causality analysis, forecast error variance decomposition and impulse response functions of VAR models and estimation of SVAR and SVEC models. 2023-06-16
r-doparallel public Provides a parallel backend for the %dopar% function using the parallel package. 2023-06-16
r-cairo public Cairo graphics device that can be use to create high-quality vector (PDF, PostScript and SVG) and bitmap output (PNG,JPEG,TIFF), and high-quality rendering in displays (X11 and Win32). Since it uses the same back-end for all output, copying across formats is WYSIWYG. Files are created without the dependence on X11 or other external programs. This device supports alpha channel (semi-transparent drawing) and resulting images can contain transparent and semi-transparent regions. It is ideal for use in server environments (file output) and as a replacement for other devices that don't have Cairo's capabilities such as alpha support or anti-aliasing. Backends are modular such that any subset of backends is supported. 2023-06-16
r-pspline public Smoothing splines with penalties on order m derivatives. 2023-06-16
r-udunits2 public Provides simple bindings to Unidata's udunits library. 2023-06-16
r-ttr public Functions and data to construct technical trading rules with R. 2023-06-16
r-tibble public Provides a 'tbl_df' class (the 'tibble') that provides stricter checking and better formatting than the traditional data frame. 2023-06-16
r-pryr public Useful tools to pry back the covers of R and understand the language at a deeper level. 2023-06-16
r-testthat public Software testing is important, but, in part because it is frustrating and boring, many of us avoid it. 'testthat' is a testing framework for R that is easy learn and use, and integrates with your existing 'workflow'. 2023-06-16

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