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r_test / packages

Package Name Access Summary Updated
r-rbmn public Creation, manipulation, simulation of linear Gaussian Bayesian networks from text files and more... 2025-04-22
r-r.blip public Allows the user to learn Bayesian networks from datasets containing thousands of variables. It focuses on score-based learning, mainly the 'BIC' and the 'BDeu' score functions. It provides state-of-the-art algorithms for the following tasks: (1) parent set identification - Mauro Scanagatta (2015) <http://papers.nips.cc/paper/5803-learning-bayesian-networks-with-thousands-of-variables>; (2) general structure optimization - Mauro Scanagatta (2018) <doi:10.1007/s10994-018-5701-9>, Mauro Scanagatta (2018) <http://proceedings.mlr.press/v73/scanagatta17a.html>; (3) bounded treewidth structure optimization - Mauro Scanagatta (2016) <http://papers.nips.cc/paper/6232-learning-treewidth-bounded-bayesian-networks-with-thousands-of-variables>; (4) structure learning on incomplete data sets - Mauro Scanagatta (2018) <doi:10.1016/j.ijar.2018.02.004>. Distributed under the LGPL-3 by IDSIA. 2025-04-22
r-rbldatalicense public R interface to access prices and market data with the 'Bloomberg Data License' service from <https://www.bloomberg.com/professional/product/data-license/>. As a prerequisite, a valid Data License from 'Bloomberg' is needed together with the corresponding SFTP credentials and whitelisting of the IP from which accessing the service. This software and its author are in no way affiliated, endorsed, or approved by 'Bloomberg' or any of its affiliates. 'Bloomberg' is a registered trademark. 2025-04-22
r-rbitcoinchartsapi public An R package for the BitCoinCharts.com API. 2025-04-22
r-rbitcoin public Utilities related to Bitcoin. Unified markets API interface (bitstamp, kraken, btce, bitmarket). Both public and private API calls. Integration of data structures for all markets. Support SSL. Read Rbitcoin documentation (command: ?btc) for more information. 2025-04-22
r-rbit public A simple implementation of Binary Indexed Tree by R. The BinaryIndexedTree class supports construction of Binary Indexed Tree from a vector, update of a value in the vector and query for the sum of a interval of the vector. 2025-04-22
r-rbiouml public Functions for connecting to BioUML server, querying BioUML repository and launching BioUML analyses. 2025-04-22
r-rbenchmark public rbenchmark is inspired by the Perl module Benchmark, and is intended to facilitate benchmarking of arbitrary R code. The library consists of just one function, benchmark, which is a simple wrapper around system.time. Given a specification of the benchmarking process (counts of replications, evaluation environment) and an arbitrary number of expressions, benchmark evaluates each of the expressions in the specified environment, replicating the evaluation as many times as specified, and returning the results conveniently wrapped into a data frame. 2025-04-22
r-raw public In order to facilitate R instruction for actuaries, we have organized several sets of publicly available data of interest to non-life actuaries. In addition, we suggest a set of packages, which most practicing actuaries will use routinely. Finally, there is an R markdown skeleton for basic reserve analysis. 2025-04-22
r-rattle.data public Contains the datasets used as default examples by the rattle package. The datasets themselves can be used independently of the rattle package to illustrate analytics, data mining, and data science tasks. 2025-04-22
r-ratios public Calculation of ratios between two data sets containing environmental data like element concentrations by different methods. Additionally plant element concentrations can be corrected for adhering particles (soil, airborne dust). 2025-04-22
r-ratesci public Computes confidence intervals for the rate (or risk) difference ('RD') or rate ratio (or relative risk, 'RR') for binomial proportions or Poisson rates, or for odds ratio ('OR', binomial only). Also confidence intervals for a single binomial or Poisson rate, and intervals for matched pairs. Includes skewness-corrected asymptotic score ('SCAS') methods, which have been developed in Laud (2017) <doi:10.1002/pst.1813> from Miettinen & Nurminen (1985) <doi:10.1002/sim.4780040211> and Gart & Nam (1988) <doi:10.2307/2531848>. Also includes MOVER methods (Method Of Variance Estimates Recovery) for all contrasts, derived from the Newcombe method but using equal-tailed Jeffreys intervals, and generalised for Bayesian applications incorporating prior information. So-called 'exact' methods for strictly conservative coverage are approximated using continuity corrections. Also includes methods for stratified calculations (e.g. meta-analysis), either assuming fixed effects or incorporating stratum heterogeneity. 2025-04-22
r-raters public The kappa statistic implemented by Fleiss is a very popular index for assessing the reliability of agreement among multiple observers. It is used both in the psychological and in the psychiatric field. Other fields of application are typically medicine, biology and engineering. Unfortunately,the kappa statistic may behave inconsistently in case of strong agreement between raters, since this index assumes lower values than it would have been expected. We propose a modification kappa implemented by Fleiss in case of nominal and ordinal variables. Monte Carlo simulations are used both to testing statistical hypotheses and to calculating percentile bootstrap confidence intervals based on proposed statistic in case of nominal and ordinal data. 2025-04-22
r-rateratio.test public A function which performs exact rate ratio tests and returns an object of class htest. 2025-04-22
r-ratelimitr public Allows to limit the rate at which one or more functions can be called. 2025-04-22
r-ratedistortion public An implementation of routines for solving rate-distortion problems. Rate-distortion theory is a field within information theory that examines optimal lossy compression. That is, given that some information must be lost, how can a communication channel be designed that minimizes the cost of communication error? Rate-distortion theory is concerned with the optimal (minimal cost) solution to such tradeoffs. An important tool for solving rate-distortion problems is the Blahut algorithm, developed by Richard Blahut and described in: . Blahut, R. E. (1972). Computation of channel capacity and rate-distortion functions. IEEE Transactions on Information Theory, IT-18(4), 460-473. . This package implements the basic Blahut algorithm, and additionally contains a number of `helper' functions, including a routine for searching for an information channel that minimizes cost subject to a constraint on information rate. 2025-04-22
r-rastervis public Methods for enhanced visualization and interaction with raster data. It implements visualization methods for quantitative data and categorical data, both for univariate and multivariate rasters. It also provides methods to display spatiotemporal rasters, and vector fields. See the website for examples. 2025-04-22
r-rasterlist public A S4 class has been created such that complex operations can be executed on each cells of a raster map. The raster of objects contains the traditional raster map with the addition of a list of generic objects: one object for each raster cells. It allows to write few lines of R code for complex map algebra. Two environmental applications about frequency analysis of raster map of precipitation and creation of a raster map of soil water retention curves have been presented. 2025-04-22
r-rasterize public Provides R functions to selectively rasterize components of 'grid' output. 2025-04-22
r-rasciidoc public Inspired by Karl Broman`s reader on using 'knitr' with 'asciidoc' (<http://kbroman.org/knitr_knutshell/pages/asciidoc.html>), this is merely a wrapper to 'knitr' and 'asciidoc'. 2025-04-22
r-rarity public Allows calculation of rarity weights for species and indices of rarity for assemblages of species according to different methods (Leroy et al. 2012, Insect. Conserv. Divers. 5:159-168 <doi:10.1111/j.1752-4598.2011.00148.x>; Leroy et al. 2013, Divers. Distrib. 19:794-803 <doi:10.1111/ddi.12040>). 2025-04-22
r-raptor public Performs wood cell anatomical data analyses on spatially explicit xylem (tracheids) datasets derived from thin sections of woody tissue. The package includes functions for visualisation, detection and alignment of continuous tracheid radial file (defined as rows) and individual tracheid position within an annual ring of coniferous species. This package is designed to be used with elaborate cell output, e.g. as provided with ROXAS (von Arx & Carrer, 2014 <doi:10.1016/j.dendro.2013.12.001>). The package has been validated for Picea abies, Larix Siberica, Pinus cembra and Pinus sylvestris. 2025-04-22
r-rapidxmlr public Provides XML parsing capability through the 'Rapidxml' 'C++' header-only library. 2025-04-22
r-rapidjsonr public Provides JSON parsing capability through the 'Rapidjson' 'C++' header-only library. 2025-04-22
r-rapiclient public Access services specified in OpenAPI (formerly Swagger) format. It is not a code generator. Client is generated dynamically as a list of R functions. 2025-04-22

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