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r_test / packages

Package Name Access Summary Updated
r-diagrammer public Build graph/network structures using functions for stepwise addition and deletion of nodes and edges. Work with data available in tables for bulk addition of nodes, edges, and associated metadata. Use graph selections and traversals to apply changes to specific nodes or edges. A wide selection of graph algorithms allow for the analysis of graphs. Visualize the graphs and take advantage of any aesthetic properties assigned to nodes and edges. 2023-06-16
r-nmf public Provides a framework to perform Non-negative Matrix Factorization (NMF). The package implements a set of already published algorithms and seeding methods, and provides a framework to test, develop and plug new/custom algorithms. Most of the built-in algorithms have been optimized in C++, and the main interface function provides an easy way of performing parallel computations on multicore machines. 2023-06-16
r-tkrplot public Simple mechanism for placing R graphics in a Tk widget. 2023-06-16
r-spatial public Functions for kriging and point pattern analysis. 2023-06-16
r-snowballc public An R interface to the C 'libstemmer' library that implements Porter's word stemming algorithm for collapsing words to a common root to aid comparison of vocabulary. Currently supported languages are Danish, Dutch, English, Finnish, French, German, Hungarian, Italian, Norwegian, Portuguese, Romanian, Russian, Spanish, Swedish and Turkish. 2023-06-16
r-pdftools public Utilities based on 'libpoppler' for extracting text, fonts, attachments and metadata from a PDF file. Also supports high quality rendering of PDF documents into PNG, JPEG, TIFF format, or into raw bitmap vectors for further processing in R. 2023-06-16
r-nnet public Software for feed-forward neural networks with a single hidden layer, and for multinomial log-linear models. 2023-06-16
r-minqa public Derivative-free optimization by quadratic approximation based on an interface to Fortran implementations by M. J. D. Powell. 2023-06-16
r-mass public Functions and datasets to support Venables and Ripley, "Modern Applied Statistics with S" (4th edition, 2002). 2023-06-16
r-lmtest public A collection of tests, data sets, and examples for diagnostic checking in linear regression models. Furthermore, some generic tools for inference in parametric models are provided. 2023-06-16
r-kernsmooth public Functions for kernel smoothing (and density estimation) corresponding to the book: Wand, M.P. and Jones, M.C. (1995) "Kernel Smoothing". 2023-06-16
r-irlba public Fast and memory efficient methods for truncated singular value decomposition and principal components analysis of large sparse and dense matrices. 2023-06-16
r-hunspell public Low level spell checker and morphological analyzer based on the famous 'hunspell' library <https://hunspell.github.io>. The package can analyze or check individual words as well as parse text, latex, html or xml documents. For a more user-friendly interface use the 'spelling' package which builds on this package to automate checking of files, documentation and vignettes in all common formats. 2023-06-16
r-feather public Read and write feather files, a lightweight binary columnar data store designed for maximum speed. 2023-06-16
r-bestglm public Best subset glm using information criteria or cross-validation. Implements PCR and PLS using AIC/BIC. Implements one-standard deviation rule for use with the `caret` package. 2023-06-16
r-broom public Summarizes key information about statistical objects in tidy tibbles. This makes it easy to report results, create plots and consistently work with large numbers of models at once. Broom provides three verbs that each provide different types of information about a model. tidy() summarizes information about model components such as coefficients of a regression. glance() reports information about an entire model, such as goodness of fit measures like AIC and BIC. augment() adds information about individual observations to a dataset, such as fitted values or influence measures. 2023-06-16
r-tidyselect public A backend for the selecting functions of the 'tidyverse'. It makes it easy to implement select-like functions in your own packages in a way that is consistent with other 'tidyverse' interfaces for selection. 2023-06-16
r-tidyr public An evolution of 'reshape2'. It's designed specifically for data tidying (not general reshaping or aggregating) and works well with 'dplyr' data pipelines. 2023-06-16
r-shinysky public A set of Shiny UI components includings alerts and styled buttons 2023-06-16
r-testthat public Software testing is important, but, in part because it is frustrating and boring, many of us avoid it. 'testthat' is a testing framework for R that is easy learn and use, and integrates with your existing 'workflow'. 2023-06-16
r-suppdists public Ten distributions supplementing those built into R. Inverse Gauss, Kruskal-Wallis, Kendall's Tau, Friedman's chi squared, Spearman's rho, maximum F ratio, the Pearson product moment correlation coefficient, Johnson distributions, normal scores and generalized hypergeometric distributions. In addition two random number generators of George Marsaglia are included. 2023-06-16
r-sourcetools public Tools for the reading and tokenization of R code. The 'sourcetools' package provides both an R and C++ interface for the tokenization of R code, and helpers for interacting with the tokenized representation of R code. 2023-06-16
r-rjsonio public This is a package that allows conversion to and from data in Javascript object notation (JSON) format. This allows R objects to be inserted into Javascript/ECMAScript/ActionScript code and allows R programmers to read and convert JSON content to R objects. This is an alternative to rjson package. Originally, that was too slow for converting large R objects to JSON and was not extensible. rjson's performance is now similar to this package, and perhaps slightly faster in some cases. This package uses methods and is readily extensible by defining methods for different classes, vectorized operations, and C code and callbacks to R functions for deserializing JSON objects to R. The two packages intentionally share the same basic interface. This package (RJSONIO) has many additional options to allow customizing the generation and processing of JSON content. This package uses libjson rather than implementing yet another JSON parser. The aim is to support other general projects by building on their work, providing feedback and benefit from their ongoing development. 2023-06-16
r-pkgload public Simulates the process of installing a package and then attaching it. This is a key part of the 'devtools' package as it allows you to rapidly iterate while developing a package. 2023-06-16
r-mime public Guesses the MIME type from a filename extension using the data derived from /etc/mime.types in UNIX-type systems. 2023-06-16
r-hexbin public Binning and plotting functions for hexagonal bins. 2023-06-16
r-git2r public Interface to the 'libgit2' library, which is a pure C implementation of the 'Git' core methods. Provides access to 'Git' repositories to extract data and running some basic 'Git' commands. 2023-06-16
r-fracdiff public Maximum likelihood estimation of the parameters of a fractionally differenced ARIMA(p,d,q) model (Haslett and Raftery, Appl.Statistics, 1989). 2023-06-16
r-fbasics public Provides a collection of functions to explore and to investigate basic properties of financial returns and related quantities. The covered fields include techniques of explorative data analysis and the investigation of distributional properties, including parameter estimation and hypothesis testing. Even more there are several utility functions for data handling and management. 2023-06-16
r-ellipsis public In S3 generics, it's useful to take ... so that methods can have additional argument. But this flexibility comes at a cost: misspelled arguments will be silently ignored. The ellipsis packages is an experiment that allows a generic to warn if any arguments passed in ... are not used. 2023-06-16
r-data.table public Fast aggregation of large data (e.g. 100GB in RAM), fast ordered joins, fast add/modify/delete of columns by group using no copies at all, list columns, friendly and fast character-separated-value read/write. Offers a natural and flexible syntax, for faster development. 2023-06-16
r-bit public True boolean datatype (no NAs), coercion from and to logicals, integers and integer subscripts; fast boolean operators and fast summary statistics. With 'bit' vectors you can store true binary booleans {FALSE,TRUE} at the expense of 1 bit only, on a 32 bit architecture this means factor 32 less RAM and ~ factor 32 more speed on boolean operations. Due to overhead of R calls, actual speed gain depends on the size of the vector: expect gains for vectors of size > 10000 elements. Even for one-time boolean operations it can pay-off to convert to bit, the pay-off is obvious, when such components are used more than once. Reading from and writing to bit is approximately as fast as accessing standard logicals - mostly due to R's time for memory allocation. The package allows to work with pre-allocated memory for return values by calling .Call() directly: when evaluating the speed of C-access with pre-allocated vector memory, coping from bit to logical requires only 70% of the time for copying from logical to logical; and copying from logical to bit comes at a performance penalty of 150%. the package now contains further classes for representing logical selections: 'bitwhich' for very skewed selections and 'ri' for selecting ranges of values for chunked processing. All three index classes can be used for subsetting 'ff' objects (ff-2.1-0 and higher). 2023-06-16
r-selectr public Translates a CSS3 selector into an equivalent XPath expression. This allows us to use CSS selectors when working with the XML package as it can only evaluate XPath expressions. Also provided are convenience functions useful for using CSS selectors on XML nodes. This package is a port of the Python package 'cssselect' (<https://cssselect.readthedocs.io/>). 2023-06-16
r-sandwich public Model-robust standard error estimators for cross-sectional, time series, clustered, panel, and longitudinal data. 2023-06-16
r-rvest public Wrappers around the 'xml2' and 'httr' packages to make it easy to download, then manipulate, HTML and XML. 2023-06-16
r-rstudioapi public Access the RStudio API (if available) and provide informative error messages when it's not. 2023-06-16
r-tensorflow public Interface to 'TensorFlow' <https://www.tensorflow.org/>, an open source software library for numerical computation using data flow graphs. Nodes in the graph represent mathematical operations, while the graph edges represent the multidimensional data arrays (tensors) communicated between them. The flexible architecture allows you to deploy computation to one or more 'CPUs' or 'GPUs' in a desktop, server, or mobile device with a single 'API'. 'TensorFlow' was originally developed by researchers and engineers working on the Google Brain Team within Google's Machine Intelligence research organization for the purposes of conducting machine learning and deep neural networks research, but the system is general enough to be applicable in a wide variety of other domains as well. 2023-06-16
r-afex public Convenience functions for analyzing factorial experiments using ANOVA or mixed models. aov_ez(), aov_car(), and aov_4() allow specification of between, within (i.e., repeated-measures), or mixed (i.e., split-plot) ANOVAs for data in long format (i.e., one observation per row), automatically aggregating multiple observations per individual and cell of the design. mixed() fits mixed models using lme4::lmer() and computes p-values for all fixed effects using either Kenward-Roger or Satterthwaite approximation for degrees of freedom (LMM only), parametric bootstrap (LMMs and GLMMs), or likelihood ratio tests (LMMs and GLMMs). afex_plot() provides a high-level interface for interaction or one-way plots using ggplot2, combining raw data and model estimates. afex uses type 3 sums of squares as default (imitating commercial statistical software). 2023-06-16
r-zip public Cross-Platform 'zip' Compression Library. A replacement for the 'zip' function, that does not require any additional external tools on any platform. 2023-06-16
r-xml2 public Work with XML files using a simple, consistent interface. Built on top of the 'libxml2' C library. 2023-06-16
r-sys public Drop-in replacements for the base system2() function with fine control and consistent behavior across platforms. Supports clean interruption, timeout, background tasks, and streaming STDIN / STDOUT / STDERR over binary or text connections. Arguments on Windows automatically get encoded and quoted to work on different locales. 2023-06-16
r-stanheaders public The C++ header files of the Stan project are provided by this package, but it contains no R code or function documentation. There is a shared object containing part of the 'CVODES' library, but it is not accessible from R. 'StanHeaders' is only useful for developers who want to utilize the 'LinkingTo' directive of their package's DESCRIPTION file to build on the Stan library without incurring unnecessary dependencies. The Stan project develops a probabilistic programming language that implements full or approximate Bayesian statistical inference via Markov Chain Monte Carlo or 'variational' methods and implements (optionally penalized) maximum likelihood estimation via optimization. The Stan library includes an advanced automatic differentiation scheme, 'templated' statistical and linear algebra functions that can handle the automatically 'differentiable' scalar types (and doubles, 'ints', etc.), and a parser for the Stan language. The 'rstan' package provides user-facing R functions to parse, compile, test, estimate, and analyze Stan models. 2023-06-16
r-scales public Graphical scales map data to aesthetics, and provide methods for automatically determining breaks and labels for axes and legends. 2023-06-16
r-rzmq public Interface to the 'ZeroMQ' lightweight messaging kernel (see <http://www.zeromq.org/> for more information). 2023-06-16
r-rjson public Converts R object into JSON objects and vice-versa. 2023-06-16
r-rappdirs public An easy way to determine which directories on the users computer you should use to save data, caches and logs. A port of Python's 'Appdirs' (\url{https://github.com/ActiveState/appdirs}) to R. 2023-06-16
r-pcapp public Provides functions for robust PCA by projection pursuit. The methods are described in Croux et al. (2006) <doi:10.2139/ssrn.968376>, Croux et al. (2013) <doi:10.1080/00401706.2012.727746>, Todorov and Filzmoser (2013) <doi:10.1007/978-3-642-33042-1_31>. 2023-06-16
r-modelmetrics public Collection of metrics for evaluating models written in C++ using 'Rcpp'. Popular metrics include area under the curve, log loss, root mean square error, etc. 2023-06-16
r-mapproj public Converts latitude/longitude into projected coordinates. 2023-06-16
r-htmltools public Tools for HTML generation and output. 2023-06-16

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