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r-netindices
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Given a network (e.g. a food web), estimates several network indices. These include: Ascendency network indices, Direct and indirect dependencies, Effective measures, Environ network indices, General network indices, Pathway analysis, Network uncertainty indices and constraint efficiencies and the trophic level and omnivory indices of food webs.
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2025-04-22 |
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r-netdata
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This package contains all data needed for Dan McFarland's SNA R labs.
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2025-04-22 |
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r-nestfs
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Implementation of forward selection based on cross-validated linear and logistic regression.
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2025-04-22 |
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r-nestedcohort
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Estimate hazard ratios, survival curves and attributable risks for cohorts with missing covariates, using Cox models or Kaplan-Meier estimated for strata. This handles studies nested within cohorts, such as case-cohort studies with stratified sampling. See http://www.r-project.org/doc/Rnews/Rnews_2008-1.pdf
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2025-04-22 |
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r-nephro
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Set of functions to estimate renal function and other phenotypes of interest in nephrology based on different biomechimal traits. MDRD, CKD-EPI, and Virga equations are compared in Pattaro (2013) <doi:10.1159/000351043>, where the respective references are given. In addition, the software includes Stevens (2008) <doi:10.1053/j.ajkd.2007.11.018> and Cockroft (1976) <doi:10.1159/000180580> formulas.
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2025-04-22 |
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r-neighbr
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Classification, regression, and clustering with k nearest neighbors algorithm. Implements several distance and similarity measures, covering continuous and logical features. Outputs ranked neighbors. Most features of this package are directly based on the PMML specification for KNN.
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2025-04-22 |
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r-negbinbetabinreg
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The Negative Binomial regression with mean and shape modeling and mean and variance modeling and Beta Binomial regression with mean and dispersion modeling.
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2025-04-22 |
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r-needy
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needy is a small utility library designed to make testing function inputs less difficult. R is a dynamically typed language, but larger projects need input checking for scalabity. needy offers a single function, require_a( ), which lets you specify the traits an input object should have, such as class, size, numerical properties or number of parameters, while reducing boilerplate code and aiding debugging.
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2025-04-22 |
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r-needs
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A simple function for easier package loading and auto-installation.
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2025-04-22 |
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r-neatranges
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Collapse, partition, combine, fill gaps in and expand date/time ranges.
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2025-04-22 |
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r-neat
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Includes functions and examples to compute NEAT, the Network Enrichment Analysis Test described in Signorelli et al. (2016, <DOI:10.1186/s12859-016-1203-6>).
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2025-04-22 |
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r-nearender
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Performs network enrichment analysis against functional gene sets. Benchmarks networks. Renders raw gene profile matrices of dimensionality "N genes x N samples" into the space of gene set (typically pathway) enrichment scores of dimensionality "N pathways x N samples".
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2025-04-22 |
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r-ndp
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An interactive presentation on the topic of normal distribution using 'rmarkdown' and 'shiny' packages. It is helpful to those who want to learn normal distribution quickly and get a hands on experience. The presentation has a template for solving problems on normal distribution. Runtime examples are provided in the package function as well as at <https://kartikeyastat.shinyapps.io/NormalDistribution/>.
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2025-04-22 |
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r-ncopula
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Construct and manipulate hierarchical Archimedean copulas with multivariate compound distributions. The model used is the one of Cossette et al. (2017) <doi:10.1016/j.insmatheco.2017.06.001>.
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2025-04-22 |
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r-ncg
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Computes the noncentral gamma function: pdf, cdf, quantile function and inverse for the noncentrality parameter.
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2025-04-22 |
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r-ncf
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R functions for analyzing spatial (cross-)covariance: the nonparametric (cross-)covariance function, the spline correlogram, the nonparametric phase coherence function, local indicators of spatial association (LISA), (Mantel) correlogram, (Partial) Mantel test.
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2025-04-22 |
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r-ncdunnett
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Computes the noncentral Dunnett's test distribution (pdf, cdf and quantile) and generates random numbers.
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2025-04-22 |
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r-ncbit
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making NCBI taxonomic data locally available and searchable as an R object
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2025-04-22 |
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r-nb.mclust
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Model-based clustering of high-dimensional non-negative data that follow Generalized Negative Binomial distribution. All functions in this package applies to either continuous or integer data. Correlation between variables are allowed, while samples are assumed to be independent.
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2025-04-22 |
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r-nbddirichlet
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The Dirichlet (aka NBD-Dirichlet) model describes the purchase incidence and brand choice of consumer products. We estimate the model and summarize various theoretical quantities of interest to marketing researchers. Also provides functions for making tables that compare observed and theoretical statistics.
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2025-04-22 |
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r-nbconvertr
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Calls the 'Jupyter'/'IPython' script 'nbconvert' to create vignettes from notebooks. Those notebooks ('.ipynb' files) are files containing rich text, code, and its output. Code cells can be edited and evaluated interactively. See <http://ipython.org/notebook.html> for more information.
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2025-04-22 |
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r-nbclust
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It provides 30 indexes for determining the optimal number of clusters in a data set and offers the best clustering scheme from different results to the user.
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2025-04-22 |
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r-nbc4va
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An implementation of the Naive Bayes Classifier (NBC) algorithm used for Verbal Autopsy (VA) built on code from Miasnikof et al (2015) <DOI:10.1186/s12916-015-0521-2>.
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2025-04-22 |
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r-nb
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Estimate the effective population size of a closed population using genetic data collected from two or more data points.
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2025-04-22 |
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r-nat.utils
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Utility functions that may be of general interest but are specifically required by the 'NeuroAnatomy Toolbox' ('nat'). Includes functions to provide a basic make style system to update files based on timestamp information, file locking and 'touch' utility. Convenience functions for working with file paths include 'abs2rel', 'split_path' and 'common_path'. Finally there are utility functions for working with 'zip' and 'gzip' files including integrity tests.
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2025-04-22 |
