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r_test / packages

Package Name Access Summary Updated
r-masae public An S4 implementation of the unbiased extension of the model- assisted synthetic-regression estimator proposed by Mandallaz (2013) <DOI:10.1139/cjfr-2012-0381>, Mandallaz et al. (2013) <DOI:10.1139/cjfr-2013-0181> and Mandallaz (2014) <DOI:10.1139/cjfr-2013-0449>. It yields smaller variances than the standard bias correction, the generalised regression estimator. 2025-04-22
r-marl public Functions provided allow data simulation; construction of weighted relative likelihood functions; clustering and principal component analysis based on weighted relative likelihood functions. 2025-04-22
r-markmyassignment public Automatic marking of R assignments for students and teachers based on 'testthat' test suites. 2025-04-22
r-marima public Multivariate ARIMA and ARIMA-X estimation using Spliid's algorithm (marima()) and simulation (marima.sim()). 2025-04-22
r-mareymap public Local recombination rates are graphically estimated across a genome using Marey maps. 2025-04-22
r-march public Computation of various Markovian models for categorical data including homogeneous Markov chains of any order, MTD models, Hidden Markov models, and Double Chain Markov Models. 2025-04-22
r-mar public R functions for multivariate autoregressive analysis 2025-04-22
r-maptree public Functions with example data for graphing, pruning, and mapping models from hierarchical clustering, and classification and regression trees. 2025-04-22
r-mapplots public Create simple maps; add sub-plots like pie plots to a map or any other plot; format, plot and export gridded data. The package was developed for displaying fisheries data but most functions can be used for more generic data visualisation. 2025-04-22
r-mapmisc public A minimal, light-weight set of tools for producing nice looking maps in R, with support for map projections. 2025-04-22
r-maples public MAPLES is a general method for the estimation of age profiles that uses standard micro-level demographic survey data. The aim is to estimate smoothed age profiles and relative risks for time-fixed and time-varying covariates. 2025-04-22
r-manytests public Performs the multiple testing procedures of Cox (2011) <doi:10.5170/CERN-2011-006> and Wong and Cox (2007) <doi:10.1080/02664760701240014>. 2025-04-22
r-mangrove public Methods for performing genetic risk prediction from genotype data. You can use it to perform risk prediction for individuals, or for families with missing data. 2025-04-22
r-mangotraining public Datasets designed to be used in conjunction with Mango Solutions training materials and the book SAMS Teach Yourself R in 24 Hours (ISBN: 978-0-672-33848-9). 2025-04-22
r-mancie public High-dimensional data integration is a critical but difficult problem in genomics research because of potential biases from high-throughput experiments. We present MANCIE, a computational method for integrating two genomic data sets with homogenous dimensions from different sources based on a PCA procedure as an approximation to a Bayesian approach. 2025-04-22
r-managelocalrepo public This will allow easier management of a CRAN-style repository on local networks (i.e. not on CRAN). This might be necessary where hosted packages contain intellectual property owned by a corporation. 2025-04-22
r-mams public Designing multi-arm multi-stage studies with (asymptotically) normal endpoints and known variance. 2025-04-22
r-mallet public This package allows you to train topic models in mallet and load results directly into R. 2025-04-22
r-malani public Find dark genes. These genes are often disregarded due to no detected mutation or differential expression, but are important in coordinating the functionality in cancer networks. 2025-04-22
r-makeproject public This package creates an empty framework of files and directories for the "Load, Clean, Func, Do" structure described by Josh Reich. 2025-04-22
r-makefiler public A user-friendly interface for the construction of 'Makefiles'. 2025-04-22
r-mailr public Interface to Apache Commons Email to send emails from R. 2025-04-22
r-mail public Easy to use package for sending email notifications with status information from R 2025-04-22
r-magicfor public Magic functions to obtain results from for loops. 2025-04-22
r-magclass public Data class for increased interoperability working with spatial- temporal data together with corresponding functions and methods (conversions, basic calculations and basic data manipulation). The class distinguishes between spatial, temporal and other dimensions to facilitate the development and interoperability of tools build for it. Additional features are name-based addressing of data and internal consistency checks (e.g. checking for the right data order in calculations). 2025-04-22

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