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r-telegram.bot
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public |
Provides a pure interface for the 'Telegram Bot API' <http://core.telegram.org/bots/api>. In addition to the pure API implementation, it features a number of tools to make the development of 'Telegram' bots with R easy and straightforward, providing an easy-to-use interface that takes some work off the programmer.
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2023-06-16 |
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r-tcltk2
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A series of additional Tcl commands and Tk widgets with style and various functions (under Windows: DDE exchange, access to the registry and icon manipulation) to supplement the tcltk package
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2023-06-16 |
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r-tciapathfinder
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A wrapper for The Cancer Imaging Archive's REST API. The Cancer Imaging Archive (TCIA) hosts de-identified medical images of cancer available for public download, as well as rich metadata for each image series. TCIA provides a REST API for programmatic access to the data. This package provides simple functions to access each API endpoint. For more information, see <https://github.com/pamelarussell/TCIApathfinder> and TCIA's website.
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2023-06-16 |
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r-taoteprogramming
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Art-like behavior based on randomness
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2023-06-16 |
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r-taipan
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A tool to help create shiny apps for selecting and annotating elements of images. Users must supply images, questions, and answer choices. The user interface is a dynamic shiny app, that displays the images and questions and answer choices. The data generated can be saved to a file that can be used for subsequent analysis. The original purpose was to annotate still images from tennis video for face recognition and emotion detection purposes.
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2023-06-16 |
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r-synet
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Infers sympatry matrices from distributional data and analyzes them in order to identify groups of species cohesively connected.
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2023-06-16 |
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r-svunit
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A complete unit test system and functions to implement its GUI part
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2023-06-16 |
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r-survtrunc
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Package performs Cox regression and survival distribution function estimation when the survival times are subject to double truncation. The estimation procedure for each method involves inverse probability weighting, where the weights correspond to the inverse of the selection probabilities and are estimated using the survival times and truncation times only. Both methods require that the survival and truncation times are quasi-independent. A test for checking this independence assumption is also included in this package. The functions available in this package for Cox regression, survival distribution function estimation, and testing independence under double truncation are based on the following methods, respectively: Rennert and Xie (2017) <doi:10.1111/biom.12809>, Shen (2010) <doi:10.1007/s10463-008-0192-2>, Martin and Betensky (2005) <doi:10.1198/016214504000001538>.
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2023-06-16 |
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r-survrm2adapt
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Performs the procedure proposed by Horiguchi et al. (2018) <doi:10.1002/sim.7661>. The method specifies a set of truncation time points tau's for calculating restricted mean survival times (RMST), performs testing for equality, and estimates the difference in RMST between two groups at the specified tau's. Multiplicity by specifying several tau's is taken into account in this procedure.
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2023-06-16 |
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r-survgini
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The Gini concentration test for survival data is a nonparametric test based on the Gini index for testing the equality of two survival distributions from the point of view of concentration. The package compares different nonparametric tests (asymptotic Gini test, permutation Gini test, log-rank test, Gray-Tsiatis test and Wilcoxon test) and computes their p-values.
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2023-06-16 |
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r-sunclarco
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Survival analysis for unbalanced clusters using Archimedean copulas (Prenen et al. (2016) <DOI:10.1111/rssb.12174>).
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2023-06-16 |
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r-stsm.class
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This package defines an S4 class for structural time series models and provides some basic methods to work with it.
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2023-06-16 |
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r-storr
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Creates and manages simple key-value stores. These can use a variety of approaches for storing the data. This package implements the base methods and support for file system, in-memory and DBI-based database stores.
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2023-06-16 |
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r-steiniv
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Routines for computing different types of linear estimators, based on instrumental variables (IVs), including the semi-parametric Stein-like (SPS) estimator, originally introduced by Judge and Mittelhammer (2004) <DOI:10.1198/016214504000000430>.
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2023-06-16 |
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r-umpire
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The Ultimate Microrray Prediction, Reality and Inference Engine (UMPIRE) is a package to facilitate the simulation of realistic microarray data sets with link to associate outcomes. See Zhang and Coombes (2012) <doi:10.1186/1471-2105-13-S13-S1>.
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2023-06-16 |
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r-txtplot
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Provides functions to produce rudimentary ascii graphics directly in the terminal window. Provides a basic plotting function (and equivalents of curve, density, acf and barplot) as well as a boxplot function.
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2023-06-16 |
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r-twilio
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The Twilio web service provides an API for computer programs to interact with telephony. The included functions wrap the SMS and MMS portions of Twilio's API, allowing users to send and receive text messages from R. See <https://www.twilio.com/docs/> for more information.
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2023-06-16 |
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r-triangle
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Provides the "r, q, p, and d" distribution functions for the triangle distribution.
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2023-06-16 |
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r-trendsegmentr
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Performs the detection of point anomalies and linear trend changes for univariate time series by implementing the bottom-up unbalanced wavelet transformation proposed by H. Maeng and P. Fryzlewicz (2019) <http://personal.lse.ac.uk/maengh/>. The estimated number and locations of the change-points are returned with the piecewise-linear estimator for signal.
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2023-06-16 |
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r-tideharmonics
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Implements harmonic analysis of tidal and sea-level data. Over 400 harmonic tidal constituents can be estimated, all with daily nodal corrections. Time-varying mean sea-levels can also be used.
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2023-06-16 |
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r-threg
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Fit a threshold regression model based on the first-hitting-time of a boundary by the sample path of a Wiener diffusion process. The threshold regression methodology is well suited to applications involving survival and time-to-event data.
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2023-06-16 |
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r-tbd
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Estimation of the survivor average causal effect under outcomes truncated by death, which requires the existence of a substitution variable. It can be applied to both experimental and observational data.
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2023-06-16 |
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r-tabulog
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Convert semi-structured log files (such as 'Apache' access.log files) into a tabular format (data.frame) using a standard template system.
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2023-06-16 |
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r-stressr
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Forms queries to submit to the Cleveland Federal Reserve Bank web site's financial stress index data site. Provides query functions for both the composite stress index and the components data. By default the download includes daily time series data starting September 25, 1991. The functions return a class of either type easing or cfsi which contain a list of items related to the query and its graphical presentation. The list includes the time series data as an xts object. The package provides four lattice time series plots to render the time series data in a manner similar to the bank's own presentation.
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2023-06-16 |
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r-strategy
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Users can build and test customized quantitative trading strategies. Some quantitative trading strategies are already implemented, e.g. various moving-average filters with trend following approaches. The implemented class called "Strategy" allows users to access several methods to analyze performance figures, plots and backtest the strategies. Furthermore, custom strategies can be added, a generic template is available. The custom strategies require a certain input and output so they can be called from the Strategy-constructor.
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2023-06-16 |
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r-staplr
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Provides function to manipulate PDF files: fill out PDF forms; merge multiple PDF files into one; remove selected pages from a file; rename multiple files in a directory; rotate entire pdf document; rotate selected pages of a pdf file; Select pages from a file; splits single input PDF document into individual pages; splits single input PDF document into parts from given points.
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2023-06-16 |
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r-sra
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This package (sra) provides a set of tools to analyse artificial-selection response datasets. The data typically feature for several generations the average value of a trait in a population, the variance of the trait, the population size and the average value of the parents that were chosen to breed. Sra implements two families of models aiming at describing the dynamics of the genetic architecture of the trait during the selection response. The first family relies on purely descriptive (phenomenological) models, based on an autoregressive framework. The second family provides different mechanistic models, accounting e.g. for inbreeding, mutations, genetic and environmental canalization, or epistasis. The parameters underlying the dynamics of the time series are estimated by maximum likelihood. The sra package thus provides (i) a wrapper for the R functions mle() and optim() aiming at fitting in a convenient way a predetermined set of models, and (ii) some functions to plot and analyze the output of the models.
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2023-06-16 |
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r-uscensus2000cdp
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US Census 2000 Designated Places shapefiles and additional demographic data from the SF1 100 percent files. This data set contains polygon files in lat/lon coordinates and the corresponding demographic data for a number of different variables.
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2023-06-16 |
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r-uptimerobot
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Provide a set of wrappers to call all the endpoints of UptimeRobot API which includes various kind of ping, keep-alive and speed tests. See <https://uptimerobot.com/> for more information.
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2023-06-16 |
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r-unrepx
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Provides half-normal plots, reference plots, and Pareto plots of effects from an unreplicated experiment, along with various pseudo-standard-error measures, simulated reference distributions, and other tools. Many of these methods are described in Daniel C. (1959) <doi:10.1080/00401706.1959.10489866> and/or Lenth R.V. (1989) <doi:10.1080/00401706.1989.10488595>, but some new approaches are added and integrated in one package.
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2023-06-16 |
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r-unbalhaar
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The package implements top-down and bottom-up algorithms for nonparametric function estimation in Gaussian noise using Unbalanced Haar wavelets.
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2023-06-16 |
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r-ukgasapi
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Allows users to access live UK gas market information via National Grid's API.
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2023-06-16 |
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r-ubcrm
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Two Phase I designs are implemented in the package: the classical 3+3 and the Continual Reassessment Method. Simulations tools are also available to estimate the operating characteristics of the methods with several user-dependent options.
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2023-06-16 |
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r-types
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Provides a simple type annotation for R that is usable in scripts, in the R console and in packages. It is intended as a convention to allow other packages to use the type information to provide error checking, automatic documentation or optimizations.
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2023-06-16 |
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r-tsvr
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Tools for timescale decomposition of the classic variance ratio of community ecology. Tools are as described in Zhao et al (in prep), extending commonly used methods introduced by Peterson et al (1975) <doi: 10.2307/1936306>.
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2023-06-16 |
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r-tm.plugin.lexisnexis
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Provides a 'tm' Source to create corpora from articles exported from the 'LexisNexis' content provider as HTML files. It is able to read both text content and meta-data information (including source, date, title, author and pages). Note that the file format is highly unstable: there is no warranty that this package will work for your corpus, and you may have to adjust the code to adapt it to your particular format.
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2023-06-16 |
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r-tlemix
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TLE implements a general framework for robust fitting of finite mixture models. Parameter estimation is performed using the EM algorithm.
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2023-06-16 |
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r-threeboost
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This package implements a thresholded version of the EEBoost algorithm described in [Wolfson (2011, JASA)]. EEBoost is a general-purpose method for variable selection which can be applied whenever inference would be based on an estimating equation. The package currently implements variable selection based on the Generalized Estimating Equations, but can also accommodate user-provided estimating functions. Thresholded EEBoost is a generalization which allows multiple variables to enter the model at each boosting step.
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2023-06-16 |
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r-thermocouple
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Temperature measurement data, equations and methods for thermocouples, wire RTD, thermistors, IC thermometers, bimetallic strips and the ITS-90.
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2023-06-16 |
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r-tdroc
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Compute time-dependent ROC curve from censored survival data using nonparametric weight adjustments.
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2023-06-16 |
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r-tariff
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Implement the Tariff algorithm for coding cause-of-death from verbal autopsies. The Tariff method was originally proposed in James et al (2011) <DOI:10.1186/1478-7954-9-31> and later refined as Tariff 2.0 in Serina, et al. (2015) <DOI:10.1186/s12916-015-0527-9>. Note that this package was not developed by authors affiliated with the Institute for Health Metrics and Evaluation and thus unintentional discrepancies may exist between the this implementation and the implementation available from IHME.
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2023-06-16 |
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r-tactile
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Extensions to 'lattice', providing new high-level functions, methods for existing functions, panel functions, and a theme.
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2023-06-16 |
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r-tablerdash
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'R' interface to the 'Tabler' HTML template. See more here <https://tabler.io>. 'tablerDash' is a light 'Bootstrap 4' dashboard template. There are different layouts available such as a one page dashboard or a multi page template, where the navigation menu is contained in the navigation bar. A fancy example is available at <https://dgranjon.shinyapps.io/shinyMons/>.
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2023-06-16 |
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r-tableplot
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Description:
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2023-06-16 |
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r-svmplus
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Implementation of Support Vector Machines Plus (SVM+) for classification problems. See (Vladimir et. al, 2009, <doi:10.1016/j.neunet.2009.06.042>) for theoretical details and see (Li et. al, 2016, <https://github.com/okbalefthanded/svmplus_matlab>) for implementation details in 'MATLAB'.
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2023-06-16 |
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r-svdvisual
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Some visualization tools based on Singular Value Decomposition
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2023-06-16 |
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r-survregcenscov
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The main function of this package allows estimation of a Weibull Regression for a right-censored endpoint, one interval-censored covariate, and an arbitrary number of non-censored covariates. Additional functions allow to switch between different parametrizations of Weibull regression used by different R functions, inference for the mean difference of two arbitrarily censored Normal samples, and estimation of canonical parameters from censored samples for several distributional assumptions.
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2023-06-16 |
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r-survlong
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Kernel weighting methods for estimation of proportional hazards models with intermittently observed longitudinal covariates.
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2023-06-16 |
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r-surveyoutliers
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At present, the only functionality is the calculation of optimal one-sided winsorizing cutoffs. The main function is optimal.onesided.cutoff.bygroup. It calculates the optimal tuning parameter for one-sided winsorisation, and so calculates winsorised values for a variable of interest. See the help file for this function for more details and an example.
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2023-06-16 |
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r-sudokualt
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Tools for making, retrieving, displaying and solving sudoku games. This package is an alternative to the earlier sudoku-solver package, 'sudoku'. The present package uses a slightly different algorithm, has a simpler coding and presents a few more sugar tools, such as plot and print methods. Solved sudoku games are of some interest in Experimental Design as examples of Latin Square designs with additional balance constraints.
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2023-06-16 |
