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r_test / packages

Package Name Access Summary Updated
r-madsim public This function allows to generate two biological conditions synthetic microarray dataset which has similar behavior to those currently observed with common platforms. User provides a subset of parameters. Available default parameters settings can be modified. 2025-04-22
r-madr public Estimates average treatment effects using model average double robust (MA-DR) estimation. The MA-DR estimator is defined as weighted average of double robust estimators, where each double robust estimator corresponds to a specific choice of the outcome model and the propensity score model. The MA-DR estimator extend the desirable double robustness property by achieving consistency under the much weaker assumption that either the true propensity score model or the true outcome model be within a specified, possibly large, class of models. 2025-04-22
r-maditr public Package provides pipe-style interface for 'data.table'. It preserves all 'data.table' features without significant impact on performance. 'let' and 'take' functions are simplified interfaces for most common data manipulation tasks. For example, you can write 'mtcars %>% take(mean(mpg), by = am)' for aggregation or 'mtcars %>% let(hp_wt = hp/wt, hp_wt_mpg = hp_wt/mpg)' for modification. Use 'take_if/let_if' for conditional aggregation/modification. 'query_if' function translates its arguments one-to-one to '[.data.table' method. Additionally there are some conveniences such as automatic 'data.frame' conversion to 'data.table'. 2025-04-22
r-maddison public Contains the Maddison Project database, which provides estimates of GDP per capita for all countries in the world between AD 1 and 2010. See http://www.ggdc.net/maddison for more information. 2025-04-22
r-mad public A collection of functions for conducting a meta-analysis with mean differences data. It uses recommended procedures as described in The Handbook of Research Synthesis and Meta-Analysis (Cooper, Hedges, & Valentine, 2009). 2025-04-22
r-mac public This is an integrated meta-analysis package for conducting a correlational research synthesis. One of the unique features of this package is in its integration of user-friendly functions to facilitate statistical analyses at each stage in a meta-analysis with correlations. It uses recommended procedures as described in The Handbook of Research Synthesis and Meta-Analysis (Cooper, Hedges, & Valentine, 2009). 2025-04-22
r-lzerospikeinference public An implementation of algorithms described in Jewell and Witten (2017) <arXiv:1703.08644>. 2025-04-22
r-luzlogr public Provides flexible but lightweight logging facilities for R scripts. Supports priority levels for logs and messages, flagging messages, capturing script output, switching logs, and logging to files or connections. 2025-04-22
r-lunar public Provides functions to calculate lunar and other environmental covariates. 2025-04-22
r-lumberjack public A framework that allows for easy logging of changes in data. Main features: start tracking changes by adding a single line of code to an existing script. Track changes in multiple datasets, using multiple loggers. Add custom-built loggers or use loggers offered by other packages. 2025-04-22
r-lucid public Print vectors (and data frames) of floating point numbers using a non-scientific format optimized for human readers. Vectors of numbers are rounded using significant digits, aligned at the decimal point, and all zeros trailing the decimal point are dropped. See: Wright (2016). Lucid: An R Package for Pretty-Printing Floating Point Numbers. In JSM Proceedings, Statistical Computing Section. Alexandria, VA: American Statistical Association. 2270-2279. 2025-04-22
r-ltxsparklines public Sparklines are small plots (about one line of text high), made popular by Edward Tufte. This package is the interface from R to the LaTeX package sparklines by Andreas Loeffer and Dan Luecking (<http://www.ctan.org/pkg/sparklines>). It can work with Sweave or knitr or other engines that produce TeX. The package can be used to plot vectors, matrices, data frames, time series (in ts or zoo format). 2025-04-22
r-ltsbase public This is a new tool to estimate Ridge and Liu estimators based on LTS method in multiple linear regression analysis. 2025-04-22
r-ltr public A set of functions to execute the linear-transformation of replicate (LTR) algorithm for preprocessing of microarray data 2025-04-22
r-ltpdvar public Calculation of rectifying LTPD and AOQL plans for sampling inspection by variables which minimize mean inspection cost per lot of process average quality. 2025-04-22
r-ltable public Constructs tables of counts and proportions out of data sets. It has simplified syntax appealing for novice and even for advanced user under time pressure. It is particularly suitable for exploratory data analysis or presentation to single out most appropriate pieces of tabulated information. The other important feature is possibility to insert tables to Excel and Word documents. 2025-04-22
r-lsrs public Rapid satellite data streams in operational applications have clear benefits for monitoring land cover, especially when information can be delivered as fast as changing surface conditions. Over the past decade, remote sensing has become a key tool for monitoring and predicting environmental variables by using satellite data. This package presents the main applications in remote sensing for land surface monitoring and land cover mapping (soil, vegetation, water...). Tomlinson, C.J., Chapman, L., Thornes, E., Baker, C (2011) <doi:10.1002/met.287>. 2025-04-22
r-lsr public A collection of tools intended to make introductory statistics easier to teach, including wrappers for common hypothesis tests and basic data manipulation. It accompanies Navarro, D. J. (2015). Learning Statistics with R: A Tutorial for Psychology Students and Other Beginners, Version 0.5. [Lecture notes] School of Psychology, University of Adelaide, Adelaide, Australia. ISBN: 978-1-326-18972-3. URL: http://health.adelaide.edu.au/psychology/ccs/teaching/lsr/. 2025-04-22
r-lsplsglm public Fit logistic regression models using LS-PLS approaches to analyse both clinical and genomic data. (C. Bazzoli and S. Lambert-Lacroix. (2017) Classification using LS-PLS with logistic regression based on both clinical and gene expression variables <https://hal.archives-ouvertes.fr/hal-01405101>). 2025-04-22
r-lspls public Implements the LS-PLS (least squares - partial least squares) method described in for instance Jørgensen, K., Segtnan, V. H., Thyholt, K., Næs, T. (2004) "A Comparison of Methods for Analysing Regression Models with Both Spectral and Designed Variables" Journal of Chemometrics, 18(10), 451--464, <doi:10.1002/cem.890>. 2025-04-22
r-lspline public Linear splines with convenient parametrisations such that (1) coefficients are slopes of consecutive segments or (2) coefficients are slope changes at consecutive knots. Knots can be set manually or at break points of equal-frequency or equal-width intervals covering the range of 'x'. The implementation follows Greene (2003), chapter 7.2.5. 2025-04-22
r-lsmontecarlo public The package compiles functions for calculating prices of American put options with Least Squares Monte Carlo method. The option types are plain vanilla American put, Asian American put, and Quanto American put. The pricing algorithms include variance reduction techniques such as Antithetic Variates and Control Variates. Additional functions are given to derive "price surfaces" at different volatilities and strikes, create 3-D plots, quickly generate Geometric Brownian motion, and calculate prices of European options with Black & Scholes analytical solution. 2025-04-22
r-lsm public When the values of the outcome variable Y are either 0 or 1, the function lsm() calculates the estimation of the log likelihood in the saturated model. This model is characterized by Llinas (2006, ISSN:2389-8976) in section 2.3 through the assumptions 1 and 2. The function LogLik() works (almost perfectly) when the number of independent variables K is high, but for small K it calculates wrong values in some cases. For this reason, when Y is dichotomous and the data are grouped in J populations, it is recommended to use the function lsm() because it works very well for all K. 2025-04-22
r-lshorth public Calculates the (localised) length of the shorth and supplies corresponding diagnostic plots. 2025-04-22
r-lsdv public Fit a least square dummy variable regression 2025-04-22

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