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r-tatest
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public |
The ta-test is a modified two-sample or two-group t-test of Gosset (1908). In small samples with less than 15 replicates,the ta-test significantly reduces type I error rate but has almost the same power with the t-test and hence can greatly enhance reliability or reproducibility of discoveries in biology and medicine. The ta-test can test single null hypothesis or multiple null hypotheses without needing to correct p-values.
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2025-04-22 |
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r-tarifx
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A collection of various utility and convenience functions.
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2025-04-22 |
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r-tariff
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public |
Implement the Tariff algorithm for coding cause-of-death from verbal autopsies. The Tariff method was originally proposed in James et al (2011) <DOI:10.1186/1478-7954-9-31> and later refined as Tariff 2.0 in Serina, et al. (2015) <DOI:10.1186/s12916-015-0527-9>. Note that this package was not developed by authors affiliated with the Institute for Health Metrics and Evaluation and thus unintentional discrepancies may exist between the this implementation and the implementation available from IHME.
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2025-04-22 |
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r-tar
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public |
Identification and estimation of the autoregressive threshold models with Gaussian noise, as well as positive-valued time series. The package provides the identification of the number of regimes, the thresholds and the autoregressive orders, as well as the estimation of remain parameters. The package implements the methodology from the 2005 paper: Modeling Bivariate Threshold Autoregressive Processes in the Presence of Missing Data <DOI:10.1081/STA-200054435>.
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2025-04-22 |
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r-tapkee
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Wrapper for using 'tapkee' command line utility, it allows to run it from inside R and catch the results for further analysis and plotting. 'Tapkee' is a program for fast dimension reduction (see <http://tapkee.lisitsyn.me/> for more details).
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2025-04-22 |
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r-taoteprogramming
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public |
Art-like behavior based on randomness
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2025-04-22 |
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r-tangram
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public |
Provides an extensible formula system to quickly and easily create production quality tables. The steps of the process are formula parser, statistical content generation from data, to rendering. Each step of the process is separate and user definable thus creating a set of building blocks for highly extensible table generation. A user is not limited by any of the choices of the package creator other than the formula grammar. For example, one could chose to add a different S3 rendering function and output a format not provided in the default package. Or possibly one would rather have Gini coefficients for their statistical content. Routines to achieve New England Journal of Medicine style, Lancet style and Hmisc::summaryM() statistics are provided. The package contains rendering for HTML5, Rmarkdown and an indexing format for use in tracing and tracking are provided.
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2025-04-22 |
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r-tandem
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A two-stage regression method that can be used when various input data types are correlated, for example gene expression and methylation in drug response prediction. In the first stage it uses the upstream features (such as methylation) to predict the response variable (such as drug response), and in the second stage it uses the downstream features (such as gene expression) to predict the residuals of the first stage. In our manuscript (Aben et al., 2016, <doi:10.1093/bioinformatics/btw449>), we show that using TANDEM prevents the model from being dominated by gene expression and that the features selected by TANDEM are more interpretable.
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2025-04-22 |
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r-taipan
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public |
A tool to help create shiny apps for selecting and annotating elements of images. Users must supply images, questions, and answer choices. The user interface is a dynamic shiny app, that displays the images and questions and answer choices. The data generated can be saved to a file that can be used for subsequent analysis. The original purpose was to annotate still images from tennis video for face recognition and emotion detection purposes.
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2025-04-22 |
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r-tailloss
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Set of tools to estimate the probability in the upper tail of the aggregate loss distribution using different methods: Panjer recursion, Monte Carlo simulations, Markov bound, Cantelli bound, Moment bound, and Chernoff bound.
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2025-04-22 |
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r-tactile
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public |
Extensions to 'lattice', providing new high-level functions, methods for existing functions, panel functions, and a theme.
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2025-04-22 |
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r-tabusearch
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public |
Tabu search algorithm for binary configurations. A basic version of the algorithm as described by Fouskakis and Draper (2007) <doi:10.1111/j.1751-5823.2002.tb00174.x>.
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2025-04-22 |
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r-tabulog
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public |
Convert semi-structured log files (such as 'Apache' access.log files) into a tabular format (data.frame) using a standard template system.
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2025-04-22 |
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r-tabulizerjars
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public |
'Java' .jar files for the 'Tabula' <http://tabula.technology/> 'Java' library, which are required by the 'tabulizer' R package. The version numbering of this package corresponds to versions of 'tabula-java' library releases <https://github.com/tabulapdf/tabula-java/releases/>.
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2025-04-22 |
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r-tabletolongform
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A wrapper to a set of algorithms designed to recognise positional cues present in hierarchical for-human Tables (which would normally be interpreted visually by the human brain) to decompose, then reconstruct the data into machine-readable LongForm Dataframes.
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2025-04-22 |
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r-tablerdash
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'R' interface to the 'Tabler' HTML template. See more here <https://tabler.io>. 'tablerDash' is a light 'Bootstrap 4' dashboard template. There are different layouts available such as a one page dashboard or a multi page template, where the navigation menu is contained in the navigation bar. A fancy example is available at <https://dgranjon.shinyapps.io/shinyMons/>.
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2025-04-22 |
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r-tableplot
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Description:
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2025-04-22 |
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r-tablemonster
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public |
Provides a user friendly interface to generation of booktab style tables using 'xtable'.
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2025-04-22 |
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r-tablematrix
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Provides two classes extending 'data.table' class. Simple 'tableList' class wraps 'data.table' and any additional structures together. More complex 'tableMatrix' class combines 'data.table' and 'matrix'. See <http://github.com/InferenceTechnologies/tableMatrix> for more information and examples.
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2025-04-22 |
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r-tablehtml
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A tool to create and style HTML tables with CSS. These can be exported and used in any application that accepts HTML (e.g. 'shiny', 'rmarkdown', 'PowerPoint'). It also provides functions to create CSS files (which also work with shiny).
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2025-04-22 |
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r-table1heatmap
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public |
Table 1 is the classical way to describe the patients in a clinical study. The amount of splits in the data in such a table is limited. Table1Heatmap draws a heatmap of all crosstables that can be generated with the data. Users can choose between showing the actual crosstables or direction of effect of associations, and highlight associations by number of patients or p-values.
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2025-04-22 |
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r-table1
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Create HTML tables of descriptive statistics, as one would expect to see as the first table (i.e. "Table 1") in a medical/epidemiological journal article.
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2025-04-22 |
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r-tablaxlsx
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Some functions are included in this package for writing tables in Excel format suitable for distribution.
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2025-04-22 |
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r-t2eq
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Contains functions for applying the T^2-test for equivalence. The T^2-test for equivalence is a multivariate two-sample equivalence test. Distance measure of the test is the Mahalanobis distance. For multivariate normally distributed data the T^2-test for equivalence is exact and UMPI. The function T2EQ() implements the T^2-test for equivalence according to Wellek (2010) <DOI:10.1201/ebk1439808184>. The function T2EQ.dissolution.profiles.hoffelder() implements a variant of the T^2-test for equivalence according to Hoffelder (2016) <http://www.ecv.de/suse_item.php?suseId=Z|pi|8430> for the equivalence comparison of highly variable dissolution profiles.
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2025-04-22 |
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r-syntaxr
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A set of functions for generating 'SPSS' syntax files from the R environment.
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2025-04-22 |
