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r-pawacc
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public |
This is a collection of functions to process, format and store accelerometer data.
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2025-04-22 |
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r-patternator
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public |
Provides a set of functions to efficiently recognize and clean the continuous dorsal pattern of a female brown anole lizard (Anolis sagrei) traced from 'ImageJ', an open platform for scientific image analysis (see <https://imagej.net> for more information), and extract common features such as the pattern sinuosity indices, coefficient of variation, and max-min width.
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2025-04-22 |
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r-pathlibr
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public |
An OO Interface for path manipulation, emulating pythons "pathlib".
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2025-04-22 |
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r-patentsview
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public |
Provides functions to simplify the 'PatentsView' API (<http://www.patentsview.org/api/doc.html>) query language, send GET and POST requests to the API's seven endpoints, and parse the data that comes back.
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2025-04-22 |
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r-patchsynctex
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public |
This utility eases the debugging of literate documents ('noweb' files) by patching the synchronization information (the '.synctex(.gz)' file) produced by 'pdflatex' with concordance information produced by 'Sweave' or 'knitr' and 'Sweave' or 'knitr' ; this allows for bilateral communication between a text editor (visualizing the 'noweb' source) and a viewer (visualizing the resultant 'PDF'), thus bypassing the intermediate 'TeX' file.
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2025-04-22 |
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r-patchplot
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public |
Functions to generate scatterplots with images patches instead of usual glyphs, with associated utilities.
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2025-04-22 |
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r-paswr
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public |
Data and functions for the book PROBABILITY and STATISTICS WITH R.
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2025-04-22 |
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r-pastis
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public |
A pre-processor for mrBayes that assimilates sequences, taxonomic information and tree constraints as per xxx. The main functions of interest for most users will be pastis_simple, pastis_main and conch. The main analysis is conducted with pastis_simple or pastis_main followed by a manual execution of mrBayes (>3.2). The placement of taxa not contained in the tree constraint can be investigated using conch.
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2025-04-22 |
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r-pastecs
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public |
Regularisation, decomposition and analysis of space-time series. The pastecs R package is a PNEC-Art4 and IFREMER (Benoit Beliaeff <[email protected]>) initiative to bring PASSTEC 2000 functionalities to R.
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2025-04-22 |
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r-password
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public |
Create random passwords of letters, numbers and punctuation.
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2025-04-22 |
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r-passport
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public |
Smooths the process of working with country names and codes via powerful parsing, standardization, and conversion utilities arranged in a simple, consistent API. Country name formats include multiple sources including the Unicode Common Locale Data Repository (CLDR, <http://cldr.unicode.org/>) common-sense standardized names in hundreds of languages.
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2025-04-22 |
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r-pass.lme
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public |
Power and sample size calculation for testing fixed effect coefficients in multilevel linear mixed effect models with one or more than one independent populations. Laird, Nan M. and Ware, James H. (1982) <doi:10.2307/2529876>.
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2025-04-22 |
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r-pas
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public |
An R package for polygenic trait analysis.
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2025-04-22 |
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r-partsm
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public |
This package performs basic functions to fit and predict periodic autoregressive time series models. These models are discussed in the book P.H. Franses (1996) "Periodicity and Stochastic Trends in Economic Time Series", Oxford University Press. Data set analyzed in that book is also provided. NOTE: the package was orphaned during several years. It is now only maintained, but no major enhancement are expected, and the maintainer cannot provide any support.
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2025-04-22 |
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r-partitionmetric
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public |
partitionMetric computes a distance between two partitions of a set.
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2025-04-22 |
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r-partitionmap
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public |
Low-dimensional embedding, using Random Forests for multiclass classification
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2025-04-22 |
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r-partitionbefsp
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public |
A collection of functions that can be used to estimate selection and complementarity effects, sensu Loreau & Hector (2001) <doi:10.1038/35083573>, even in cases where data are only available for a random subset of species (i.e. incomplete sample-level data). A full derivation and explanation of the statistical corrections used here is available in Clark et al. (2019) <doi:10.1111/2041-210X.13285>.
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2025-04-22 |
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r-partialor
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public |
Computes Odds Ratio adjusted for a vector of possibly continuous covariates
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2025-04-22 |
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r-partiallyoverlapping
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public |
Tests for a comparison of two partially overlapping samples. A comparison of means using the partially overlapping samples t-test: See Derrick, Russ, Toher and White (2017), Test statistics for the comparison of means for two samples which include both paired observations and independent observations, Journal of Modern Applied Statistical Methods, 16(1). A comparison of proportions using the partially overlapping samples z-test: See Derrick, Dobson-Mckittrick, Toher and White (2015), Test statistics for comparing two proportions with partially overlapping samples. Journal of Applied Quantitative Methods, 10(3).
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2025-04-22 |
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r-partdsa
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public |
A novel tool for generating a piecewise constant estimation list of increasingly complex predictors based on an intensive and comprehensive search over the entire covariate space.
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2025-04-22 |
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r-parsetools
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public |
Tools and utilities for dealing with parse data. Parse data represents the parse tree as data with location and type information. This package provides functions for navigating the parse tree as a data frame.
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2025-04-22 |
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r-parse
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public |
Model-based clustering and identifying informative features based on regularization methods. The package includes three regularization methods - PAirwise Reciprocal fuSE (PARSE) penalty proposed by Wang, Zhou and Hoeting (2016), the adaptive L1 penalty (APL1) and the adaptive pairwise fusion penalty (APFP). Heatmaps are included to shown the identification of informative features.
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2025-04-22 |
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r-parentoffspring
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public |
Conduct the Parent-Offspring Test Using Monomorphic SNP Markers. The similarity to the parents is computed for each offspring, and a plot of similarity for all offspring is produced. One can keep the offspring above some threshold for the similarity for further studies.
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2025-04-22 |
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r-paran
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public |
An implementation of Horn's technique for numerically and graphically evaluating the components or factors retained in a principle components analysis (PCA) or common factor analysis (FA). Horn's method contrasts eigenvalues produced through a PCA or FA on a number of random data sets of uncorrelated variables with the same number of variables and observations as the experimental or observational data set to produce eigenvalues for components or factors that are adjusted for the sample error-induced inflation. Components with adjusted eigenvalues greater than one are retained. paran may also be used to conduct parallel analysis following Glorfeld's (1995) suggestions to reduce the likelihood of over-retention.
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2025-04-22 |
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r-paramtest
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public |
Run simulations or other functions while easily varying parameters from one iteration to the next. Some common use cases would be grid search for machine learning algorithms, running sets of simulations (e.g., estimating statistical power for complex models), or bootstrapping under various conditions. See the 'paramtest' documentation for more information and examples.
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2025-04-22 |
