|
r-amctestmaker
|
public |
Generate code for use with the Optical Mark Recognition free software Auto Multiple Choice (AMC). More specifically, this package provides functions that use as input the question and answer texts, and output the LaTeX code for AMC.
|
2025-04-22 |
|
r-amcp
|
public |
Accompanies "Designing experiments and analyzing data: A model comparison perspective" (3rd ed.) by Maxwell, Delaney, & Kelley (forthcoming from Routledge). Contains all of the data sets in the book's chapters and end-of-chapter exercises. Information about the book is available at <http://www.DesigningExperiments.com>.
|
2025-04-22 |
|
r-amap.seq
|
public |
An Approximated Most Average Powerful Test with Optimal FDR Control with Application to RNA-seq Data
|
2025-04-22 |
|
r-altmeta
|
public |
Provides alternative statistical methods for meta-analysis, including new heterogeneity tests and measures that are robust to outliers.
|
2025-04-22 |
|
r-alterryx
|
public |
A tool to access each of the 'Alteryx' Gallery 'API' endpoints. Users can queue jobs, poll job status, and retrieve application output as a data frame. You will need an 'Alteryx' Server license and have 'Alteryx' Gallery running to utilize this package. The 'API' is accessed through the 'URL' that you setup for the server running 'Alteryx' Gallery and more information on the endpoints can be found at <https://gallery.alteryx.com/api-docs/>.
|
2025-04-22 |
|
r-alscpc
|
public |
Using of the accelerated line search algorithm for simultaneously diagonalize a set of symmetric positive definite matrices.
|
2025-04-22 |
|
r-alphavantageclient
|
public |
Download data from the Alpha Vantage API (<https://www.alphavantage.co/>). Alpha Vantage is a RESTful API which provides various financial data, including stock prices and technical indicators. There is documentation for the underlying API available here: <https://www.alphavantage.co/documentation/>. To get access to this API, the user needs to first claim an API key: <https://www.alphavantage.co/support/>.
|
2025-04-22 |
|
r-alluvial
|
public |
Creating alluvial diagrams (also known as parallel sets plots) for multivariate and time series-like data.
|
2025-04-22 |
|
r-allpossiblespellings
|
public |
Contains functions possSpells.fnc and batch.possSpells.fnc.
|
2025-04-22 |
|
r-alleleretain
|
public |
Simulate the effect of management or demography on allele retention and inbreeding accumulation in bottlenecked populations of animals with overlapping generations.
|
2025-04-22 |
|
r-allehap
|
public |
Tools to simulate alphanumeric alleles, impute genetic missing data and reconstruct non-recombinant haplotypes from pedigree databases in a deterministic way. Allelic simulations can be implemented taking into account many factors (such as number of families, markers, alleles per marker, probability and proportion of missing genotypes, recombination rate, etc). Genotype imputation can be used with simulated datasets or real databases (previously loaded in .ped format). Haplotype reconstruction can be carried out even with missing data, since the program firstly imputes each family genotype (without a reference panel), to later reconstruct the corresponding haplotypes for each family member. All this considering that each individual (due to meiosis) should unequivocally have two alleles per marker (one inherited from each parent) and thus imputation and reconstruction results can be deterministically calculated.
|
2025-04-22 |
|
r-allanvar
|
public |
A collection of tools for stochastic sensor error characterization using the Allan Variance technique originally developed by D. Allan.
|
2025-04-22 |
|
r-algorithmia
|
public |
The company, Algorithmia, houses the largest marketplace of online algorithms. This package essentially holds a bunch of REST wrappers that make it very easy to call algorithms in the Algorithmia platform and access files and directories in the Algorithmia data API. To learn more about the services they offer and the algorithms in the platform visit <http://algorithmia.com>. More information for developers can be found at <http://developers.algorithmia.com>.
|
2025-04-22 |
|
r-algebraichaplopackage
|
public |
Two unordered pairs of data of two different snips positions is haplotyped by resolving a small number ob closed equations.
|
2025-04-22 |
|
r-algaeclassify
|
public |
Functions designed to facilitate the assignment of morpho-functional group (MFG) classifications to phytoplankton species based on a combination of taxonomy (Class,Order) and a suite of 7 binomial functional traits. Classifications can also be made using only a species list and a database of trait-derived classifications included in the package. MFG classifications are derived from Salmaso et al. (2015) <doi:10.1111/fwb.12520> and this reference should be cited when using the package. The 'algaeClassify' package is a product of the GEISHA (Global Evaluation of the Impacts of Storms on freshwater Habitat and Structure of phytoplankton Assemblages), funded by CESAB (Centre for Synthesis and Analysis of Biodiversity) and the USGS John Wesley Powell Center, with data and other support provided by members of GLEON (Global Lake Ecology Observation Network). This software is preliminary or provisional and is subject to revision. It is being provided to meet the need for timely best science. The software has not received final approval by the U.S. Geological Survey (USGS). No warranty, expressed or implied, is made by the USGS or the U.S. Government as to the functionality of the software and related material nor shall the fact of release constitute any such warranty. The software is provided on the condition that neither the USGS nor the U.S. Government shall be held liable for any damages resulting from the authorized on unauthorized use of the software.
|
2025-04-22 |
|
r-alfr
|
public |
Allows you to connect to an 'Alfresco' content management repository and interact with its contents using simple and intuitive functions. You will be able to establish a connection session to the 'Alfresco' repository, read and upload content and manage folder hierarchies. For more details on the 'Alfresco' content management repository see <https://www.alfresco.com/ecm-software/document-management>.
|
2025-04-22 |
|
r-ald
|
public |
It provides the density, distribution function, quantile function, random number generator, likelihood function, moments and Maximum Likelihood estimators for a given sample, all this for the three parameter Asymmetric Laplace Distribution defined in Koenker and Machado (1999). This is a special case of the skewed family of distributions available in Galarza et.al. (2017) <doi:10.1002/sta4.140> useful for quantile regression.
|
2025-04-22 |
|
r-albopictus
|
public |
Implements discrete time deterministic and stochastic age-structured population dynamics models described in Erguler and others (2016) <doi:10.1371/journal.pone.0149282> and Erguler and others (2017) <doi:10.1371/journal.pone.0174293>.
|
2025-04-22 |
|
r-alabama
|
public |
Augmented Lagrangian Adaptive Barrier Minimization Algorithm for optimizing smooth nonlinear objective functions with constraints. Linear or nonlinear equality and inequality constraints are allowed.
|
2025-04-22 |
|
r-akmeans
|
public |
Adaptive K-means algorithm with various threshold settings. It support two distance metric: Euclidean distance, Cosine distance (1 - cosine similarity) In version 1.1, it contains one more threshold condition.
|
2025-04-22 |
|
r-ake
|
public |
Continuous and discrete (count or categorical) estimation of density, probability mass function (p.m.f.) and regression functions are performed using associated kernels. The cross-validation technique and the local Bayesian procedure are also implemented for bandwidth selection.
|
2025-04-22 |
|
r-aim
|
public |
R functions for adaptively constructing index models for continuous, binary and survival outcomes. Implementation requires loading R-pacakge "survival"
|
2025-04-22 |
|
r-aidar
|
public |
Read objects from the AIDA (<http://aida.freehep.org/>) file and make them available as dataframes in R.
|
2025-04-22 |
|
r-agsemisc
|
public |
High-featured panel functions for bwplot and xyplot, some plot management helpers, various convenience functions
|
2025-04-22 |
|
r-agrmt
|
public |
Calculate agreement or consensus in ordered rating scales. The package implements van der Eijk's (2001) <DOI: 10.1023/A:1010374114305> measure of agreement A, which can be used to describe agreement, consensus, or polarization among respondents. It also implements measures of consensus (dispersion) by Leik, Tatsle and Wierman, Blair and Lacy, Kvalseth, Berry and Mielke, and Garcia-Montalvo and Reynal-Querol. Furthermore, an implementation of Galtungs AJUS-system is provided to classify distributions, as well as a function to identify the position of multiple modes.
|
2025-04-22 |
