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r_test / packages

Package Name Access Summary Updated
r-bosonsampling public Classical Boson Sampling using the algorithm of Clifford and Clifford (2017) <arXiv:1706.01260>. Also provides functions for generating random unitary matrices, evaluation of matrix permanents (both real and complex) and evaluation of complex permanent minors. 2025-04-22
r-borrowr public Estimate population average treatment effects from a primary data source with borrowing from supplemental sources. Causal estimation is done with either a Bayesian linear model or with Bayesian additive regression trees (BART) to adjust for confounding. Borrowing is done with multisource exchangeability models (MEMs). For information on BART, see Chipman, George, & McCulloch (2010) <doi:10.1214/09-AOAS285>. For information on MEMs, see Kaizer, Koopmeiners, & Hobbs (2018) <doi10.1093/biostatistics/kxx031>. 2025-04-22
r-bootstrap public Software (bootstrap, cross-validation, jackknife) and data for the book "An Introduction to the Bootstrap" by B. Efron and R. Tibshirani, 1993, Chapman and Hall. This package is primarily provided for projects already based on it, and for support of the book. New projects should preferentially use the recommended package "boot". 2025-04-22
r-bootruin public We provide a framework for testing the probability of ruin in the classical (compound Poisson) risk process. It also includes some procedures for assessing and comparing the performance between the bootstrap test and the test using asymptotic normality. 2025-04-22
r-boom public A C++ library for Bayesian modeling, with an emphasis on Markov chain Monte Carlo. Although boom contains a few R utilities (mainly plotting functions), its primary purpose is to install the BOOM C++ library on your system so that other packages can link against it. 2025-04-22
r-boolnet public Provides methods to reconstruct and generate synchronous, asynchronous, probabilistic and temporal Boolean networks, and to analyze and visualize attractors in Boolean networks. 2025-04-22
r-bondvaluation public Analysis of large datasets of fixed coupon bonds, allowing for irregular first and last coupon periods and various day count conventions. With this package you can compute the yield to maturity, the modified and MacAulay durations and the convexity of fixed-rate bonds. It provides the function AnnivDates, which can be used to evaluate the quality of the data and return time-invariant properties and temporal structure of a bond. 2025-04-22
r-boltzmm public Provides probability computation, data generation, and model estimation for fully-visible Boltzmann machines. It follows the methods described in Nguyen and Wood (2016a) <doi:10.1162/NECO_a_00813> and Nguyen and Wood (2016b) <doi:10.1109/TNNLS.2015.2425898>. 2025-04-22
r-bnsl public From a given data frame, this package learns its Bayesian network structure based on a selected score. 2025-04-22
r-binomsamsize public A suite of functions to compute confidence intervals and necessary sample sizes for the parameter p of the Bernoulli B(p) distribution under simple random sampling or under pooled sampling. Such computations are e.g. of interest when investigating the incidence or prevalence in populations. The package contains functions to compute coverage probabilities and coverage coefficients of the provided confidence intervals procedures. Sample size calculations are based on expected length. 2025-04-22
r-bigmemory public Create, store, access, and manipulate massive matrices. Matrices are allocated to shared memory and may use memory-mapped files. Packages 'biganalytics', 'bigtabulate', 'synchronicity', and 'bigalgebra' provide advanced functionality. 2025-04-22
r-bayhap public The package BayHap performs simultaneous estimation of uncertain haplotype frequencies and association with haplotypes based on generalized linear models for quantitative, binary and survival traits. Bayesian statistics and Markov Chain Monte Carlo techniques are the theoretical framework for the methods of estimation included in this package. Prior values for model parameters can be included by the user. Convergence diagnostics and statistical and graphical analysis of the sampling output can be also carried out. 2025-04-22
r-ca public Computation and visualization of simple, multiple and joint correspondence analysis. 2025-04-22
r-c3net public This package allows inferring gene regulatory networks with direct physical interactions from microarray expression data using C3NET. 2025-04-22
r-c2c public Compare two classifications or clustering solutions that may or may not have the same number of classes, and that might have hard or soft (fuzzy, probabilistic) membership. Calculate various metrics to assess how the clusters compare to each other. The calculations are simple, but provide a handy tool for users unfamiliar with matrix multiplication. This package is not geared towards traditional accuracy assessment for classification/ mapping applications - the motivating use case is for comparing a probabilistic clustering solution to a set of reference or existing class labels that could have any number of classes (that is, without having to degrade the probabilistic clustering to hard classes). 2025-04-22
r-bwimage public A computational tool to describe patterns in black and white images from natural structures. 'bwimage' implemented functions for exceptionally broad subject. For instance, 'bwimage' provide examples that range from calculation of canopy openness, description of patterns in vertical vegetation structure, to patterns in bird nest structure. 2025-04-22
r-bvenn public This package implements a simple alternative to the traditional Venn diagram. It depicts each overlap as a separate bubble with area proportional to the overlap size. Relation of the bubbles to input sets is shown by their their arrangement. 2025-04-22
r-bvar public Toolkit for the estimation of hierarchical Bayesian vector autoregressions. Implements hierarchical prior selection for conjugate priors in the fashion of Giannone, Lenza & Primiceri (2015) <doi:10.1162/REST_a_00483>. Allows for the computation of impulse responses and forecasts and provides functionality for assessing results. 2025-04-22
r-businessduration public Calculates business duration between two dates. This excluding weekends, public holidays and non-business hours. 2025-04-22
r-busdater public Get a current financial year, start of current month, End of current month, start of financial year and end of it. Allow for offset from the date. 2025-04-22
r-bursts public An implementation of Jon Kleinberg's burst detection algorithm. Uses an infinite Markov model to detect periods of increased activity in a series of discrete events with known times, and provides a simple visualization of the results. 2025-04-22
r-burstmisc public Script search, corner, genetic optimization, permutation tests, write expect test. 2025-04-22
r-burstfin public A suite of functions for finance, including the estimation of variance matrices via a statistical factor model or Ledoit-Wolf shrinkage. 2025-04-22
r-bundesligr public All final tables of Germany's highest football (soccer!) league, the Bundesliga. Contains data from 1964 to 2016. 2025-04-22
r-bundesbank public Download data from the time-series databases of the Bundesbank, the German central bank. See the overview at the Bundesbank website (<https://www.bundesbank.de/en/statistics/time-series-databases>) for available series. The package provides only a single function, getSeries(), which supports both traditional and real-time datasets; it will also download meta data if available. Downloaded data can automatically be arranged in various formats, such as data frames or 'zoo' series. The data may optionally be cached, so as to avoid repeated downloads of the same series. 2025-04-22

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