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r-rgen
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public |
Provides popular sampling distributions C++ routines based in armadillo through a header file approach.
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2024-01-16 |
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r-rgdax
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public |
Allow access to both public and private end points to Coinbase Pro (erstwhile GDAX) cryptocurrency exchange. For authenticated flow, users must have valid api, secret and passphrase to be able to connect.
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2024-01-16 |
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r-rfishbase
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public |
A programmatic interface to 'FishBase', re-written based on an accompanying 'RESTful' API. Access tables describing over 30,000 species of fish, their biology, ecology, morphology, and more. This package also supports experimental access to 'SeaLifeBase' data, which contains nearly 200,000 species records for all types of aquatic life not covered by 'FishBase.'
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2024-01-16 |
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r-rgcca
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public |
Multi-block data analysis concerns the analysis of several sets of variables (blocks) observed on the same group of individuals. The main aims of the RGCCA package are: to study the relationships between blocks and to identify subsets of variables of each block which are active in their relationships with the other blocks. This package allows to (i) run R/SGCCA and related methods, (ii) help the user to find out the optimal parameters for R/SGCCA such as regularization parameters (tau or sparsity), (iii) evaluate the stability of the RGCCA results and their significance, (iv) build predictive models from the R/SGCCA. (v) Generic print() and plot() functions apply to all these functionalities.
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2024-01-16 |
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r-rfutilities
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public |
Utilities for Random Forest model selection, class balance correction, significance test, cross validation and partial dependency plots.
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2024-01-16 |
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r-rgabriel
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public |
Analyze multi-level one-way experimental designs where there are unequal sample sizes and population variance homogeneity can not be assumed. To conduct the Gabriel test <doi:10.2307/2286265>, create two vectors: one for your observations and one for the factor level of each observation. The function, rgabriel, conduct the test and save the output as a vector to input into the gabriel.plot function, which produces a confidence interval plot for Multiple Comparison.
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2024-01-16 |
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r-rfordummies
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public |
Contains all the code examples in the book "R for Dummies" (2nd edition) by Andrie de Vries and Joris Meys. You can view the table of contents as well as the sample code for each chapter.
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2024-01-16 |
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r-rformatter
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public |
The R Formatter formats R source code. It is very much based on formatR, but tries to improve it by heuristics. For example, spaces can be forced around the division operator "/".
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2024-01-16 |
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r-rfolding
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public |
The basic algorithm to perform the folding test of unimodality. Given a dataset X (d dimensional, n samples), the test checks whether the distribution of the data are rather unimodal or rather multimodal. This package stems from the following research publication: Siffer Alban, Pierre-Alain Fouque, Alexandre Termier, and Christine Largouët. "Are your data gathered?" In Proceedings of the 24th ACM SIGKDD International Conference on Knowledge Discovery Data Mining, pp. 2210-2218. ACM, 2018. <doi:10.1145/3219819.3219994>.
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2024-01-16 |
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r-rfoaas
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public |
R access to the 'FOAAS' (F... Off As A Service) web service is provided.
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2024-01-16 |
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r-retry
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public |
Provide simple mechanism to repeatedly evaluate an expression until either it succeeds or timeout exceeded. It is useful in situations that random failures could happen.
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2024-01-16 |
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r-restriktor
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public |
Allow for easy-to-use testing or evaluating of linear equality and inequality restrictions about parameters and effects in (generalized) linear statistical models.
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2024-01-16 |
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r-rflptools
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public |
Provides functions to analyse DNA fragment samples (i.e. derived from RFLP-analysis) and standalone BLAST report files (i.e. DNA sequence analysis).
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2024-01-16 |
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r-resourceselection
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public |
Resource Selection (Probability) Functions for use-availability wildlife data based on weighted distributions as described in Lele and Keim (2006) <doi:10.1890/0012-9658(2006)87%5B3021:WDAEOR%5D2.0.CO;2>, Lele (2009) <doi:10.2193/2007-535>, and Solymos & Lele (2016) <doi:10.1111/2041-210X.12432>.
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2024-01-16 |
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r-rfinterval
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public |
An integrated package for constructing random forest prediction intervals using a fast implementation package 'ranger'. This package can apply the following three methods described in Haozhe Zhang, Joshua Zimmerman, Dan Nettleton, and Daniel J. Nordman (2019) <doi:10.1080/00031305.2019.1585288>: the out-of-bag prediction interval, the split conformal method, and the quantile regression forest.
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2024-01-16 |
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r-rfacebook
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public |
Provides an interface to the Facebook API.
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2024-01-16 |
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r-rex
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None |
A friendly interface for the construction of regular expressions.
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2024-01-16 |
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r-revgeo
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public |
Function revgeo() allows you to use the Photon geocoder for OpenStreetMap <http://photon.komoot.de>, Google Maps <http://maps.google.com>, and Bing <https://www.bingmapsportal.com> to reverse geocode coordinate pairs with minimal hassle.
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2024-01-16 |
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r-revecor
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public |
An implementation of the reverse ecology framework. Reverse ecology refers to the use of genomics to study ecology with no a priori assumptions about the organism(s) under consideration, linking organisms to their environment. It allows researchers to reconstruct the metabolic networks and study the ecology of poorly characterized microbial species from their genomic information, and has substantial potentials for microbial community ecological analysis.
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2024-01-16 |
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r-revealjs
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public |
R Markdown format for 'reveal.js' presentations, a framework for easily creating beautiful presentations using HTML.
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2024-01-16 |
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r-reval
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public |
Simplified scenario testing and sensitivity analysis, redesigned to use packages 'future' and 'furrr'. Provides functions for generating function argument sets using one-factor-at-a-time (OFAT) and (sampled) permutations.
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2024-01-16 |
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r-rerddap
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public |
General purpose R client for 'ERDDAP' servers. Includes functions to search for 'datasets', get summary information on 'datasets', and fetch 'datasets', in either 'csv' or 'netCDF' format. 'ERDDAP' information: <https://upwell.pfeg.noaa.gov/erddap/information.html>.
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2024-01-16 |
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r-rethinker
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public |
Simple, native 'RethinkDB' client.
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2024-01-16 |
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r-restorepoint
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public |
Debugging with restore points instead of break points. A restore point stores all local variables when called inside a function. The stored values can later be retrieved and evaluated in a modified R console that replicates the function's environment. To debug step by step, one can simply copy & paste the function body from the R script. Particularly convenient in combination with "RStudio". See the "Github" page inst/vignettes for a tutorial.
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2024-01-16 |
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r-restimizeapi
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public |
Provides the user with functions to develop their trading strategy, uncover actionable trading ideas, and monitor consensus shifts with crowdsourced earnings and economic estimate data directly from <www.estimize.com>. Further information regarding the web services this package invokes can be found at <www.estimize.com/api>.
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2024-01-16 |
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r-ress
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public |
Contains three functions that query AuriQ Systems' Essentia Database and return the results in R. 'essQuery' takes a single Essentia command and captures the output in R, where you can save the output to a dataframe or stream it directly into additional analysis. 'read.essentia' takes an Essentia script and captures the output csv data into R, where you can save the output to a dataframe or stream it directly into additional analysis. 'capture.essentia' takes a file containing any number of Essentia commands and captures the output of the specified statements into R dataframes. Essentia can be downloaded for free at http://www.auriq.com/documentation/source/install/index.html.
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2024-01-16 |
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r-requirements
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public |
Helper function to install packages for R using an external 'requirements.txt' or a string containing diverse packages from several resources like Github or CRAN.
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2024-01-16 |
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r-rerddapxtracto
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public |
Contains three functions that access environmental data from any 'ERDDAP' data web service. The rxtracto() function extracts data along a trajectory for a given "radius" around the point. The rxtracto_3D() function extracts data in a box. The rxtractogon() function extracts data in a polygon. All of those three function use the 'rerddap' package to extract the data, and should work with any 'ERDDAP' server. There are also two functions, plotBBox() and plotTrack() that use the 'plotdap' package to simplify the creation of maps of the data.
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2024-01-16 |
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r-resistorarray
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public |
Electrical properties of resistor networks using matrix methods.
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2024-01-16 |
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r-reservoir
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public |
Measure single-storage water supply system performance using resilience, reliability, and vulnerability metrics; assess storage-yield-reliability relationships; determine no-fail storage with sequent peak analysis; optimize release decisions for water supply, hydropower, and multi-objective reservoirs using deterministic and stochastic dynamic programming; generate inflow replicates using parametric and non-parametric models; evaluate inflow persistence using the Hurst coefficient.
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2024-01-16 |
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r-resampledata
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public |
Package of data sets from "Mathematical Statistics with Resampling in R" (1st Ed. 2011, 2nd Ed. 2018) by Laura Chihara and Tim Hesterberg.
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2024-01-16 |
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r-resample
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public |
Bootstrap, permutation tests, and jackknife, featuring easy-to-use syntax.
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2024-01-16 |
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r-require
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public |
A single key function, 'Require' that makes rerun-tolerant versions of 'install.packages' and `require` for CRAN packages, packages no longer on CRAN (i.e., archived), specific versions of packages, and GitHub packages. This approach is developed to create reproducible workflows that are flexible and fast enough to use while in development stages, while able to build snapshots once a stable package collection is found. As with other functions in a reproducible workflow, this package emphasizes functions that return the same result whether it is the first or subsequent times running the function, with subsequent times being sufficiently fast that they can be run every time without undue waiting burden on the user or developer.
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2024-01-16 |
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r-repurrrsive
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public |
Recursive lists in the form of R objects, 'JSON', and 'XML', for use in teaching and examples. Examples include color palettes, Game of Thrones characters, 'GitHub' users and repositories, music collections, and entities from the Star Wars universe. Data from the 'gapminder' package is also included, as a simple data frame and in nested and split forms.
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2024-01-16 |
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r-requirer
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public |
Modularizes source code. Keeps the global environment clean, explicifies interdependencies. Inspired by 'RequireJS'<http://requirejs.org/>.
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2024-01-16 |
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r-reproducible
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public |
A collection of high-level, machine- and OS-independent tools for making reproducible and reusable content in R. The two workhorse functions are Cache() and prepInputs(). Cache() allows for nested caching, is robust to environments and objects with environments (like functions), and has deals with some classes of file-backed R objects e.g., from terra and raster packages. Both functions have been developed to be foundational components of data retrieval and processing in continuous workflow situations. In both functions, efforts are made to make the first and subsequent calls of functions have the same result, but faster at subsequent times by way of checksums and digesting. Several features are still under development, including cloud storage of cached objects, allowing for sharing between users. Several advanced options are available, see ?reproducibleOptions().
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2024-01-16 |
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r-reqres
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public |
In order to facilitate parsing of http requests and creating appropriate responses this package provides two classes to handle a lot of the housekeeping involved in working with http exchanges. The infrastructure builds upon the 'rook' specification and is thus well suited to be combined with 'httpuv' based web servers.
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2024-01-16 |
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r-request
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public |
High level and easy 'HTTP' client for 'R'. Provides functions for building 'HTTP' queries, including query parameters, body requests, headers, authentication, and more.
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2024-01-16 |
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r-reqs
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public |
Contains the function run.eqs() which calls an EQS script file, executes the EQS estimation, and, finally, imports the results as R objects. These two steps can be performed separately: call.eqs() calls and executes EQS, whereas read.eqs() imports existing EQS outputs as objects into R. It requires EQS 6.2 (build 98 or higher).
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2024-01-16 |
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r-repplab
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public |
An R Interface to 'EPP-lab' v1.0. 'EPP-lab' is a Java program for projection pursuit using genetic algorithms written by Alain Berro and S. Larabi Marie-Sainte and is included in the package. The 'EPP-lab' sources are available under https://github.com/fischuu/EPP-lab.git.
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2024-01-16 |
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r-reporter
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public |
Contains functions to create regulatory-style statistical reports. Originally designed to create tables, listings, and figures for the pharmaceutical, biotechnology, and medical device industries, these reports are generalized enough that they could be used in any industry. Generates text, rich-text, PDF, HTML, and Microsoft Word file formats. The package specializes in printing wide and long tables with automatic page wrapping and splitting. Reports can be produced with a minimum of function calls, and without relying on other table packages. The package supports titles, footnotes, page header, page footers, spanning headers, page by variables, and automatic page numbering.
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2024-01-16 |
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r-reproj
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public |
Transform coordinates from a specified source to a specified target map projection. This uses the 'PROJ' library directly, by wrapping the 'PROJ' package which leverages 'libproj', otherwise the 'proj4' package. The 'reproj()' function is generic, methods may be added to remove the need for an explicit source definition. If 'proj4' is in use 'reproj()' handles the requirement for conversion of angular units where necessary. This is for use primarily to transform generic data formats and direct leverage of the underlying 'PROJ' library. (There are transformations that aren't possible with 'PROJ' and that are provided by the 'GDAL' library, a limitation which users of this package should be aware of.) The 'PROJ' library is available at <https://proj.org/>.
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2024-01-16 |
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r-reprex
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public |
Convenience wrapper that uses the 'rmarkdown' package to render small snippets of code to target formats that include both code and output. The goal is to encourage the sharing of small, reproducible, and runnable examples on code-oriented websites, such as <https://stackoverflow.com> and <https://github.com>, or in email. The user's clipboard is the default source of input code and the default target for rendered output. 'reprex' also extracts clean, runnable R code from various common formats, such as copy/paste from an R session.
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2024-01-16 |
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r-repr
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None |
String and binary representations of objects for several formats / mime types.
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2024-01-16 |
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r-represtools
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public |
Reproducible research tools automates the creation of an analysis directory structure and work flow. There are R markdown skeletons which encapsulate typical analytic work flow steps. Functions will create appropriate modules which may pass data from one step to another.
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2024-01-16 |
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r-report
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public |
The aim of the 'report' package is to bridge the gap between R’s output and the formatted results contained in your manuscript. This package converts statistical models and data frames into textual reports suited for publication, ensuring standardization and quality in results reporting.
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2024-01-16 |
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r-reporttools
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public |
These functions are especially helpful when writing reports of data analysis using "Sweave".
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2024-01-16 |
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r-reportroc
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public |
Provides an easy way to report the results of ROC analysis, including: 1. an ROC curve. 2. the value of Cutoff, AUC (Area Under Curve), ACC (accuracy), SEN (sensitivity), SPE (specificity), PLR (positive likelihood ratio), NLR (negative likelihood ratio), PPV (positive predictive value), NPV (negative predictive value), PPA (percentage of positive accordance), NPA (percentage of negative accordance), TPA (percentage of total accordance), KAPPA (kappa value).
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2024-01-16 |
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r-reportreg
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public |
Provides an easy way to report the results of regression analysis, including: 1. Proportional hazards regression from function 'coxph' of package 'survival'; 2. Conditional logistic regression from function 'clogit' of package 'survival'; 3. Ordered logistic regression from function 'polr' of package 'MASS'; 4. Binary logistic regression from function 'glm' of package 'stats'; 5. Linear regression from function 'lm' of package 'stats'; 6. Risk regression model for survival analysis with competing risks from function 'FGR' of package 'riskRegression'; 7. Multilevel model from function 'lme' of package 'nlme'.
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2024-01-16 |
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r-rempsyc
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public |
Make your workflow faster and easier. Easily customizable plots (via 'ggplot2'), nice APA tables (following the style of the *American Psychological Association*) exportable to Word (via 'flextable'), easily run statistical tests or check assumptions, and automatize various other tasks.
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2024-01-16 |
