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r-pcamixdata
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public |
Implements principal component analysis, orthogonal rotation and multiple factor analysis for a mixture of quantitative and qualitative variables.
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2024-01-16 |
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r-pcfam
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public |
We provide several algorithms to compute the genotype ancestry scores (such as eigenvector projections) in the case where highly correlated individuals are involved.
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2024-01-16 |
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r-pcensmix
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public |
Functions for generating progressively Type-II censored data in a mixture structure and fitting models using a constrained EM algorithm. It can also create a progressive Type-II censored version of a given real dataset to be considered for model fitting.
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2024-01-16 |
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r-pbs
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public |
Periodic B Splines Basis
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2024-01-16 |
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r-paws.security.identity
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public |
Interface to 'Amazon Web Services' security, identity, and compliance services, including the 'Identity & Access Management' ('IAM') service for managing access to services and resources, and more <https://aws.amazon.com/>.
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2024-01-16 |
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r-pbo
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public |
Following the method of Bailey et al., computes for a collection of candidate models the probability of backtest overfitting, the performance degradation and probability of loss, and the stochastic dominance.
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2024-01-16 |
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r-pbrackets
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public |
Adds different kinds of brackets to a plot, including braces, chevrons, parentheses or square brackets.
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2024-01-16 |
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r-pbm
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public |
Binding models which are useful when analysing protein-ligand interactions by techniques such as Biolayer Interferometry (BLI) or Surface Plasmon Resonance (SPR). Naman B. Shah, Thomas M. Duncan (2014) <doi:10.3791/51383>. Hoang H. Nguyen et al. (2015) <doi:10.3390/s150510481>. After initial binding parameters are known, binding curves can be simulated and parameters can be varied. The models within this package may also be used to fit a curve to measured binding data using non-linear regression.
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2024-01-16 |
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r-pbkrtest
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None |
Computes p-values based on (a) Satterthwaite or Kenward-Rogers degree of freedom methods and (b) parametric bootstrap for mixed effects models as implemented in the 'lme4' package. Implements parametric bootstrap test for generalized linear mixed models as implemented in 'lme4' and generalized linear models. The package is documented in the paper by Halekoh and Højsgaard, (2012, <doi:10.18637/jss.v059.i09>). Please see 'citation("pbkrtest")' for citation details.
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2024-01-16 |
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r-paws.storage
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public |
Interface to 'Amazon Web Services' storage services, including 'Simple Storage Service' ('S3') and more <https://aws.amazon.com/>.
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2024-01-16 |
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r-paws.networking
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public |
Interface to 'Amazon Web Services' networking and content delivery services, including 'Route 53' Domain Name System service, 'CloudFront' content delivery, load balancing, and more <https://aws.amazon.com/>.
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2024-01-16 |
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r-pbimisc
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public |
A set of datasets and functions used in the book 'Modele liniowe i mieszane w R, wraz z przykladami w analizie danych'. Datasets either come from real studies or are created to be as similar as possible to real studies.
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2024-01-16 |
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r-pbibd
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public |
The PBIB designs are important type of incomplete block designs having wide area of their applications for example in agricultural experiments, in plant breeding, in sample surveys etc. This package constructs various series of PBIB designs and assists in checking all the necessary conditions of PBIB designs and the association scheme on which these designs are based on. It also assists in calculating the efficiencies of PBIB designs with any number of associate classes. The package also constructs Youden-m square designs which are Row-Column designs for the two-way elimination of heterogeneity. The incomplete columns of these Youden-m square designs constitute PBIB designs. With the present functionality, the package will be of immense importance for the researchers as it will help them to construct PBIB designs, to check if their PBIB designs and association scheme satisfy various necessary conditions for the existence, to calculate the efficiencies of PBIB designs based on any association scheme and to construct Youden-m square designs for the two-way elimination of heterogeneity. R. C. Bose and K. R. Nair (1939) <http://www.jstor.org/stable/40383923>.
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2024-01-16 |
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r-pbapply
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public |
A lightweight package that adds progress bar to vectorized R functions ('*apply'). The implementation can easily be added to functions where showing the progress is useful (e.g. bootstrap). The type and style of the progress bar (with percentages or remaining time) can be set through options. Supports several parallel processing backends including future.
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2024-01-16 |
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r-paws.management
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public |
Interface to 'Amazon Web Services' management and governance services, including 'CloudWatch' application and infrastructure monitoring, 'Auto Scaling' for automatically scaling resources, and more <https://aws.amazon.com/>.
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2024-01-16 |
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r-paws.end.user.computing
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public |
Interface to 'Amazon Web Services' end user computing services, including collaborative document editing, mobile intranet, and more <https://aws.amazon.com/>.
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2024-01-16 |
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r-paws.machine.learning
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public |
Interface to 'Amazon Web Services' machine learning services, including 'SageMaker' managed machine learning service, natural language processing, speech recognition, translation, and more <https://aws.amazon.com/machine-learning/>.
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2024-01-16 |
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r-paws.database
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public |
Interface to 'Amazon Web Services' database services, including 'Relational Database Service' ('RDS'), 'DynamoDB' 'NoSQL' database, and more <https://aws.amazon.com/>.
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2024-01-16 |
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r-paws.developer.tools
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public |
Interface to 'Amazon Web Services' developer tools services, including version control, continuous integration and deployment, and more <https://aws.amazon.com/products/developer-tools/>.
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2024-01-16 |
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r-paws.customer.engagement
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public |
Interface to 'Amazon Web Services' customer engagement services, including 'Simple Email Service', 'Connect' contact center service, and more <https://aws.amazon.com/>.
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2024-01-16 |
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r-paws.cost.management
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public |
Interface to 'Amazon Web Services' cost management services, including cost and usage reports, budgets, pricing, and more <https://aws.amazon.com/>.
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2024-01-16 |
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r-paws.compute
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public |
Interface to 'Amazon Web Services' compute services, including 'Elastic Compute Cloud' ('EC2'), 'Lambda' functions-as-a-service, containers, batch processing, and more <https://aws.amazon.com/>.
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2024-01-16 |
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r-paws.application.integration
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public |
Interface to 'Amazon Web Services' application integration services, including 'Simple Queue Service' ('SQS') message queue, 'Simple Notification Service' ('SNS') publish/subscribe messaging, and more <https://aws.amazon.com/>.
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2024-01-16 |
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r-paws.analytics
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public |
Interface to 'Amazon Web Services' 'analytics' services, including 'Elastic MapReduce' 'Hadoop' and 'Spark' big data service, 'Elasticsearch' search engine, and more <https://aws.amazon.com/>.
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2024-01-16 |
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r-paws
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public |
Interface to Amazon Web Services <https://aws.amazon.com>, including storage, database, and compute services, such as 'Simple Storage Service' ('S3'), 'DynamoDB' 'NoSQL' database, and 'Lambda' functions-as-a-service.
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2024-01-16 |
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r-pathfindr.data
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public |
This is a data-only package, containing data needed to run the CRAN package 'pathfindR', a package for enrichment analysis utilizing active subnetworks. This package contains protein-protein interaction network data, data related to gene sets and example input/output data.
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2024-01-16 |
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r-patrick
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public |
This is an extension of the 'testthat' package that lets you add parameters to your unit tests. Parameterized unit tests are often easier to read and more reliable, since they follow the DNRY (do not repeat yourself) rule.
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2024-01-16 |
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r-paswr2
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public |
Functions and data sets for the text Probability and Statistics with R, Second Edition.
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2024-01-16 |
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r-pawacc
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public |
This is a collection of functions to process, format and store accelerometer data.
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2024-01-16 |
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r-patternator
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public |
Provides a set of functions to efficiently recognize and clean the continuous dorsal pattern of a female brown anole lizard (Anolis sagrei) traced from 'ImageJ', an open platform for scientific image analysis (see <https://imagej.net> for more information), and extract common features such as the pattern sinuosity indices, coefficient of variation, and max-min width.
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2024-01-16 |
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r-patchwork
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public |
The 'ggplot2' package provides a strong API for sequentially building up a plot, but does not concern itself with composition of multiple plots. 'patchwork' is a package that expands the API to allow for arbitrarily complex composition of plots by, among others, providing mathematical operators for combining multiple plots. Other packages that try to address this need (but with a different approach) are 'gridExtra' and 'cowplot'.
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2024-01-16 |
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r-patentsview
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public |
Provides functions to simplify the 'PatentsView' API (<https://patentsview.org/apis/purpose>) query language, send GET and POST requests to the API's seven endpoints, and parse the data that comes back.
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2024-01-16 |
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r-patchsynctex
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public |
This utility eases the debugging of literate documents ('noweb' files) by patching the synchronization information (the '.synctex(.gz)' file) produced by 'pdflatex' with concordance information produced by 'Sweave' or 'knitr' and 'Sweave' or 'knitr' ; this allows for bilateral communication between a text editor (visualizing the 'noweb' source) and a viewer (visualizing the resultant 'PDF'), thus bypassing the intermediate 'TeX' file.
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2024-01-16 |
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r-paswr
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public |
Functions and data sets for the text Probability and Statistics with R.
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2024-01-16 |
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r-passport
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public |
Smooths the process of working with country names and codes via powerful parsing, standardization, and conversion utilities arranged in a simple, consistent API. Country name formats include multiple sources including the Unicode Common Locale Data Repository (CLDR, <http://cldr.unicode.org/>) common-sense standardized names in hundreds of languages.
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2024-01-16 |
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r-pastecs
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public |
Regularisation, decomposition and analysis of space-time series. The pastecs R package is a PNEC-Art4 and IFREMER (Benoit Beliaeff <[email protected]>) initiative to bring PASSTEC 2000 functionalities to R.
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2024-01-16 |
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r-password
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public |
Create random passwords of letters, numbers and punctuation.
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2024-01-16 |
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r-pass.lme
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public |
Power and sample size calculation for testing fixed effect coefficients in multilevel linear mixed effect models with one or more than one independent populations. Laird, Nan M. and Ware, James H. (1982) <doi:10.2307/2529876>.
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2024-01-16 |
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r-pas
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public |
An R package for polygenic trait analysis.
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2024-01-16 |
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r-partsm
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public |
Basic functions to fit and predict periodic autoregressive time series models. These models are discussed in the book P.H. Franses (1996) "Periodicity and Stochastic Trends in Economic Time Series", Oxford University Press. Data set analyzed in that book is also provided. NOTE: the package was orphaned during several years. It is now only maintained, but no major enhancements are expected, and the maintainer cannot provide any support.
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2024-01-16 |
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r-pareto
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public |
Utilities for the Pareto, piecewise Pareto and generalized Pareto distribution that are useful for reinsurance pricing. In particular, the package provides a non-trivial algorithm that can be used to match the expected losses of a tower of reinsurance layers with a layer-independent collective risk model. The theoretical background of the matching algorithm and most other methods are described in Ulrich Riegel (2018) <doi:10.1007/s13385-018-0177-3>.
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2024-01-16 |
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r-parbayesianoptimization
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public |
Fast, flexible framework for implementing Bayesian optimization of model hyperparameters according to the methods described in Snoek et al. <arXiv:1206.2944>. The package allows the user to run scoring function in parallel, save intermediary results, and tweak other aspects of the process to fully utilize the computing resources available to the user.
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2024-01-16 |
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r-parsnip
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public |
A common interface is provided to allow users to specify a model without having to remember the different argument names across different functions or computational engines (e.g. 'R', 'Spark', 'Stan', 'H2O', etc).
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2024-01-16 |
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r-partitionmetric
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public |
partitionMetric computes a distance between two partitions of a set.
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2024-01-16 |
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r-partitionbefsp
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public |
A collection of functions that can be used to estimate selection and complementarity effects, sensu Loreau & Hector (2001) <doi:10.1038/35083573>, even in cases where data are only available for a random subset of species (i.e. incomplete sample-level data). A full derivation and explanation of the statistical corrections used here is available in Clark et al. (2019) <doi:10.1111/2041-210X.13285>.
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2024-01-16 |
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r-partiallyoverlapping
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public |
Tests for a comparison of two partially overlapping samples. A comparison of means using the partially overlapping samples t-test: See Derrick, Russ, Toher and White (2017), Test statistics for the comparison of means for two samples which include both paired observations and independent observations, Journal of Modern Applied Statistical Methods, 16(1). A comparison of proportions using the partially overlapping samples z-test: See Derrick, Dobson-Mckittrick, Toher and White (2015), Test statistics for comparing two proportions with partially overlapping samples. Journal of Applied Quantitative Methods, 10(3).
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2024-01-16 |
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r-partdsa
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public |
A novel tool for generating a piecewise constant estimation list of increasingly complex predictors based on an intensive and comprehensive search over the entire covariate space.
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2024-01-16 |
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r-parameters
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public |
Utilities for processing the parameters of various statistical models. Beyond computing p values, CIs, and other indices for a wide variety of models (see list of supported models using the function 'insight::supported_models()'), this package implements features like bootstrapping or simulating of parameters and models, feature reduction (feature extraction and variable selection) as well as functions to describe data and variable characteristics (e.g. skewness, kurtosis, smoothness or distribution).
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2024-01-16 |
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r-parallelly
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public |
Utility functions that enhance the 'parallel' package and support the built-in parallel backends of the 'future' package. For example, availableCores() gives the number of CPU cores available to your R process as given by the operating system, 'cgroups' and Linux containers, R options, and environment variables, including those set by job schedulers on high-performance compute clusters. If none is set, it will fall back to parallel::detectCores(). Another example is makeClusterPSOCK(), which is backward compatible with parallel::makePSOCKcluster() while doing a better job in setting up remote cluster workers without the need for configuring the firewall to do port-forwarding to your local computer.
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2024-01-16 |
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r-paran
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public |
An implementation of Horn's technique for numerically and graphically evaluating the components or factors retained in a principle components analysis (PCA) or common factor analysis (FA). Horn's method contrasts eigenvalues produced through a PCA or FA on a number of random data sets of uncorrelated variables with the same number of variables and observations as the experimental or observational data set to produce eigenvalues for components or factors that are adjusted for the sample error-induced inflation. Components with adjusted eigenvalues greater than one are retained. paran may also be used to conduct parallel analysis following Glorfeld's (1995) suggestions to reduce the likelihood of over-retention.
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2024-01-16 |
