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omnia / packages

Package Name Access Summary Updated
schema None Simple data validation library 2025-03-25
clusterutils None Tools for use in compute cluster environments. 2025-03-25
sh None Python subprocess interface 2025-03-25
python-coveralls None Python interface to coveralls.io API 2025-03-25
parse_type None Simplifies to build parse types based on the parse module 2025-03-25
parse None parse() is the opposite of format() 2025-03-25
behave None behave is behaviour-driven development, Python style 2025-03-25
pint None Physical quantities module 2025-03-25
clapack None No Summary 2025-03-25
repex None OpenMM replica exchange utilities 2025-03-25
scs None scs: splittling cone solver 2025-03-25
ecos None A lightweight conic solver for second-order cone programming. 2025-03-25
cvxpy None A domain-specific language for modeling convex optimization problems in Python. 2025-03-25
cvxopt None Convex optimization package 2025-03-25
pyhmc None pyhmc: Hamiltonain Monte Carlo Sampling in Python 2025-03-25
munkres None munkres algorithm for the Assignment Problem 2025-03-25
numdifftools None Solves automatic numerical differentiation problems in one or more variables. 2025-03-25
omnia None Metapackage for the omnia.md biophysical simulation consortium. 2025-03-25
packmol None Packing Optimization for Molecular Dynamics Simulations 2025-03-25
pdbfixer None PDBFixer fixes problems in PDB files to prepare them for molecular simulation. 2025-03-25
pystallone None Python binding for Stallone java library 2025-03-25
pyemma None PyEMMA (EMMA = Emma's Markov Model Algorithms) is an open source Python/C package for analysis of extensive molecular dynamics simulations 2025-03-25
pybtex-docutils None A docutils backend for pybtex. 2025-03-25
sphinxcontrib-bibtex None A Sphinx extension for BibTeX style citations. 2025-03-25
pybtex None A BibTeX-compatible bibliography processor in Python 2025-03-25

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