liulab
by X. Shirley Liu Lab conda packages (Organization)
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Packages
| Name | Latest Version | Summary | Updated | License |
|---|
| appdirs | 1.4.0 | A small Python module for determining appropriate " + "platform-specific dirs, e.g. a "user data dir". | Mar 25, 2025 | MIT License |
| cufflinks | 2.2.1 | — | Mar 25, 2025 | Boost Software License |
| cutadapt | 1.8.1 | trim adapters from high-throughput sequencing reads | Mar 25, 2025 | MIT License |
| fastqc | 0.11.2 | — | Mar 25, 2025 | GPL |
| mageck | 0.5.2 | Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout. | Mar 25, 2025 | BSD License |
| matplotlib-venn | 0.11 | Functions for plotting area-proportional two- and three-way Venn diagrams in matplotlib. | Mar 25, 2025 | MIT License |
| pysam | 0.8.3 | pysam | Mar 25, 2025 | MIT |
| star | 2.4.2a | — | Mar 25, 2025 | GPLv3 |
| tophat | 2.1.0 | — | Mar 25, 2025 | GPL |
| vispr | 0.4.6 | VISPR is a visualization framework and analysis workflow for CRISPR/Cas9 knockout screens. VISPR is targeted on displaying results calculated by MAGeCK. | Mar 25, 2025 | MIT License |