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Performs the JIVE decomposition on a list of data sets when the data share a dimension, returning low-rank matrices that capture the joint and individual structure of the data [O'Connell, MJ and Lock, EF (2016) <doi:10.1093/bioinformatics/btw324>]. It provides two methods of rank selection when the rank is unknown, a permutation test and a BIC selection algorithm. Also included in the package are three plotting functions for visualizing the variance attributed to each data source: a bar plot that shows the percentages of the variability attributable to joint and individual structure, a heatmap that shows the structure of the variability, and principal component plots.

Type Size Name Uploaded Downloads Labels
conda 3.9 MB | osx-64/r-jive-2.1-r351h6115d3f_0.tar.bz2  5 years and 5 months ago 46 main
conda 3.9 MB | linux-64/r-jive-2.1-r351h6115d3f_0.tar.bz2  5 years and 11 months ago 149 main

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