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bismark

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Bismark is a program to map bisulfite treated sequencing reads to a genome of interest and perform methylation calls in a single step. The output can be easily imported into a genome viewer, such as SeqMonk, and enables a researcher to analyse the methylation levels of their samples straight away.

Installation

To install this package, run one of the following:

Conda
$conda install jdblischak::bismark

Usage Tracking

0.18.2_dev_a9c4148
1 / 8 versions selected
Downloads (Last 6 months): 0

About

Summary

Bismark is a program to map bisulfite treated sequencing reads to a genome of interest and perform methylation calls in a single step. The output can be easily imported into a genome viewer, such as SeqMonk, and enables a researcher to analyse the methylation levels of their samples straight away.

Last Updated

Oct 9, 2017 at 21:25

License

GNU General Public License v3 (GPLv3)

Total Downloads

25

Supported Platforms

linux-64