|
scrappie
|
public |
Scrappie is a technology demonstrator for the Oxford Nanopore Research Algorithms group
|
2025-03-25 |
|
argp-standalone
|
public |
Standalone version of arguments parsing functions from GLIBC.
|
2025-03-25 |
|
miniasm
|
public |
Ultrafast de novo assembly for long noisy reads (though having no consensus step)
|
2025-03-25 |
|
fast5-research
|
public |
ONT Research fast5 read/write package
|
2025-03-25 |
|
aiozmq
|
public |
ZeroMQ integration with asyncio.
|
2025-03-25 |
|
jvarkit-msa2vcf
|
public |
Getting a VCF file from a CLUSTAW or a FASTA alignment.
|
2025-03-25 |
|
phylosnp
|
public |
PhyloSNP: An automated generator of phylogenetic trees from SNP data.
|
2025-03-25 |
|
tensorflow-tensorboard
|
public |
TensorBoard lets you watch Tensors Flow
|
2025-03-25 |
|
idba
|
public |
IDBA is a practical iterative De Bruijn Graph De Novo Assembler for sequence assembly in bioinformatics.
|
2025-03-25 |
|
ksnp
|
public |
kSNP identifies the pan-genome SNPs in a set of genome sequences, and estimates phylogenetic trees based upon those SNPs.
|
2025-03-25 |
|
mbuffer
|
public |
mbuffer is a tool for buffering data streams with a large set of unique features
|
2025-03-25 |
|
cabal-install
|
public |
The cabal-install package provides the cabal command-line tool which simplifies the process of managing Haskell software by automating the fetching, configuration, compilation and installation of Haskell libraries and programs.
|
2025-03-25 |
|
quasr
|
public |
QUASR is lightweight pipeline for processing and analysis of high-throughput sequencing data.
|
2025-03-25 |
|
stack
|
public |
Stack is a cross-platform program for developing Haskell projects.
|
2025-03-25 |
|
magic
|
public |
MAGIC: A diffusion-based imputation method reveals gene-gene interactions in single-cell RNA-sequencing data
|
2025-03-25 |
|
readline
|
public |
library for editing command lines as they are typed in
|
2025-03-25 |
|
dm-sonnet
|
public |
Sonnet is a library built on top of TensorFlow for building complex neural networks.
|
2025-03-25 |
|
lftp
|
public |
LFTP is a sophisticated file transfer program supporting a number of network protocols (ftp, http, sftp, fish, torrent).
|
2025-03-25 |
|
age
|
public |
a tools that implements an algorithm for optimal alignment of sequences with structural variants (SVs)
|
2025-03-25 |
|
jvarkit-sam2tsv
|
public |
Prints the SAM alignments as a TAB delimited file.
|
2025-03-25 |
|
plinkseq
|
public |
PLINK/SEQ is an open-source C/C++ library for working with human genetic variation data.
|
2025-03-25 |
|
beta
|
public |
Binding and Expression Target Analysis (BETA) is a software package that integrates ChIP-seq of transcription factors or chromatin regulators with differential gene expression data to infer direct target genes.
|
2025-03-25 |
|
r-regresshaplo
|
public |
This package reconstructs haplotypes from a BAM file using a penalized regression approach.
|
2025-03-25 |
|
globus-cli
|
public |
Globus CLI
|
2025-03-25 |
|
globus-sdk
|
public |
Globus SDK for Python
|
2025-03-25 |
|
abayesqr
|
public |
aBayesQR is a viral quasispecies reconstruction algorithm that employs a maximum-likelihood framework to infer individual sequences in a mixture from high-throughput sequencing data.
|
2025-03-25 |
|
chipathlon-client
|
public |
No Summary
|
2025-03-25 |
|
svmerge
|
public |
No Summary
|
2025-03-25 |
|
cnd
|
public |
No Summary
|
2025-03-25 |
|
chipathlon
|
public |
No Summary
|
2025-03-25 |
|
phantompeakqualtools
|
public |
No Summary
|
2025-03-25 |
|
pymeanshift
|
public |
No Summary
|
2025-03-25 |
|
r-depmixs4
|
public |
No Summary
|
2025-03-25 |
|
bosco
|
public |
No Summary
|
2025-03-25 |
|
mxnet
|
public |
No Summary
|
2025-03-25 |
|
python-mxnet
|
public |
No Summary
|
2025-03-25 |
|
r-mxnet
|
public |
No Summary
|
2025-03-25 |
|
r-viridis
|
public |
No Summary
|
2025-03-25 |
|
r-visnetwork
|
public |
No Summary
|
2025-03-25 |
|
r-viridislite
|
public |
No Summary
|
2025-03-25 |
|
hiddendomains
|
public |
hiddenDomains is a suite of programs used to identify significant enrichment of ChIP-seq reads that span large domains.
|
2025-03-25 |
|
pegasus-wms
|
public |
Pegasus WMS is a configurable system for mapping and executing scientific workflows over a wide range of computational infrastructures including laptops, campus clusters, supercomputers, grids, and commercial and academic clouds.
|
2025-03-25 |
|
jbio
|
public |
No Summary
|
2025-03-25 |
|
zerone
|
public |
No Summary
|
2025-03-25 |
|
r-zerone
|
public |
No Summary
|
2025-03-25 |
|
music
|
public |
No Summary
|
2025-03-25 |
|
tensorflow-fma
|
public |
Computation using data flow graphs for scalable machine learning.
|
2025-03-25 |
|
tensorflow-cpucompat
|
public |
Computation using data flow graphs for scalable machine learning.
|
2025-03-25 |
|
parcel
|
public |
A high performance HTTP download client that leverages the speed of UDP without sacrificing reliability.
|
2025-03-25 |
|
tensorflow
|
public |
TensorFlow is a machine learning library.
|
2025-03-25 |
