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HCC / packages

Package Name Access Summary Updated
snpfinder public SNPFinder is a simple alignment-based haplotype variant caller that can be used with metagenomic sequence data. 2025-03-25
petsc public PETSc: Portable, Extensible Toolkit for Scientific Computation 2025-03-25
cub public CUB is a flexible library of cooperative threadblock primitives and other utilities for CUDA kernel programming. 2025-03-25
cuda_driver public NVIDIA linux driver 2025-03-25
libitk public ITK is an open-source, cross-platform system that provides developers with an extensive suite of software tools for image analysis. 2025-03-25
vxl public VXL (the Vision-something-Libraries) is a collection of C++ libraries designed for computer vision research and implementation. 2025-03-25
minc public Basic minc-tools from former minc repository 2025-03-25
minc-tools public Basic minc-tools from former minc repository 2025-03-25
libminc public libminc is the core library and API of the MINC toolkit 2025-03-25
autodock public AutoDock is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure. 2025-03-25
afni public AFNI is a suite of programs for looking at and analyzing 3D brain images. 2025-03-25
mesa-libglw-devel-cos6-x86_64 public (CDT) Mesa libGLw development package 2025-03-25
mesa-libglw-cos6-x86_64 public (CDT) Mesa libGLw runtime libraries and DRI drivers 2025-03-25
geoparse public Python library to access Gene Expression Omnibus Database (GEO) 2025-03-25
netpbm public Netpbm is a toolkit for manipulation of graphic images, including conversion of images between a variety of different formats. 2025-03-25
wgetter public Another command line download utility written in python 2025-03-25
htstream public A toolset for high throughput sequence analysis using a streaming approach facilitated by Linux pipes. 2025-03-25
bioconductor-pharmacogx public Contains a set of functions to perform large-scale analysis of pharmacogenomic data. 2025-03-25
r-magicaxis public Functions to make useful (and pretty) plots for scientific plotting. Additional plotting features are added for base plotting, with particular emphasis on making attractive log axis plots. 2025-03-25
r-celestial public Contains a number of common astronomy conversion routines, particularly the HMS and degrees schemes, which can be fiddly to convert between on mass due to the textural nature of the former. It allows users to coordinate match datasets quickly. It also contains functions for various cosmological calculations. 2025-03-25
mro public Microsoft R Open is the enhanced distribution of R from Microsoft Corporation. 2025-03-25
gnuplot public Gnuplot, plotting from command line 2025-03-25
xcrysden public XCrySDen is a crystalline and molecular structure visualisation program aiming at display of isosurfaces and contours, which can be superimposed on crystalline structures and interactively rotated and manipulated. 2025-03-25
smrtlink-tools public PacBio's open-source SMRT Analysis software suite is designed for use with Single Molecule, Real-Time (SMRT) Sequencing data. 2025-03-25
md-cogent public Cogent is a tool for reconstructing the coding genome using high-quality full-length transcriptome sequences. 2025-03-25

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