Bacterial analysis Toolbox for profiling the Resistome of ESKAPE pathogens using WGS
Install Miniconda and run the following commands:
export PATH=~/miniconda3/bin:$PATH
and source using source ~/.bashrc
git clone https://github.com/GunzIvan28/rMAP.git
cd rMAP
conda update -n base -y -c defaults conda
Select the appropriate installer for your computer
For Linux: conda env create -n rMAP-1.0 --file rMAP-1.0-Linux-installer.yml
For MacOS: conda env create -n rMAP-1.0 --file rMAP-1.0-macOs-installer.yml
conda activate rMAP-1.0
bash setup.sh
cd && bash clean.sh
rm -rf clean.sh
rMAP -h