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grch38-transcript-only-features-ensembl-v1
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public |
Transcript only features from Ensembl gene sets. All other features have been removed. (Alignment based annotation using proteins, cDNA, RNA-seq, etc.). Features include: transcript. Features are in GTF format
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2025-03-25 |
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grch37-transcript-only-features-gencode-v1
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public |
Transcript only features from the comprehensive set of gene annotations created on GRCh38 and mapped to GRCh37 by GENCODE (v34lift37). All other features have been removed. Some annotations were obtained from GENCODE v19 when mapping failed. Scaffoldings, assenbly patches, and alternative loci are NOT included. Features include: transcript.
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2025-03-25 |
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grch37-transcript-only-features-ensembl-v1
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public |
Transcript only features from Ensembl gene sets. All other features have been removed. (Alignment based annotation using proteins, cDNA, RNA-seq, etc.). Features include: transcript. Features are in GTF format.
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2025-03-25 |
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hg38-gene-only-features-ensembl-v1
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public |
Gene features only from Ensembl gene sets. All other features have been removed. (Alignment based annotation using proteins, cDNA, RNA-seq, etc.). Features include: gene. Features are in GTF format. Remapped from Ensembl GRCh38 to UCSC hg38
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2025-03-25 |
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grch38-gene-only-features-ensembl-v1
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public |
Gene features only from Ensembl gene sets. All other features have been removed. (Alignment based annotation using proteins, cDNA, RNA-seq, etc.). Features include: gene. Features are in GTF format
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2025-03-25 |
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hg38-scores-by-amino-acid-change-ggd-v1
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public |
Scores for each amino acid changes from missense badnass, blosum, and granthams
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2025-03-25 |
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hg19-scores-by-amino-acid-change-ggd-v1
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public |
Scores for each amino acid changes from missense badnass, blosum, and granthams
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2025-03-25 |
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grch38-scores-by-amino-acid-change-ggd-v1
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public |
Scores for each amino acid changes from missense badnass, blosum, and granthams
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2025-03-25 |
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hg38-gene-only-features-gencode-v1
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public |
Gene features only from the comprehensive set of gene anntotations including reference chromosomes, scaffoldings, assebly patches, and alternative loci. All other features have been removed. Data is specific to GENCODE Release 34 (Ensembl 100). Features include: gene. Remapped from Ensembl GRCh38 to UCSC hg38. (Scaffoldings wihtout UCSC matches are kept with Ensebml ids)
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2025-03-25 |
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hg19-gene-only-features-gencode-v1
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public |
Gene features only from the comprehensive set of gene anntotations created on GRCh38 and mapped to GRCh37 by GENCODE (v34lift37). All other features have been removed. Some annotations were obtained from GENCODE v19 when mapping failed. Scaffoldings, assenbly patches, and alternative loci are NOT included. Features include: gene. Remapped from Ensembl GRCh37 to UCSC hg19
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2025-03-25 |
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hg19-gene-only-features-ensembl-v1
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public |
Gene features only from Ensembl gene sets. All other features have been removed. (Alignment based annotation using proteins, cDNA, RNA-seq, etc.). Features include: gene. Features are in GTF format. Remapped from Ensembl GRCh37 to UCSC hg19
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2025-03-25 |
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grch38-gene-only-features-gencode-v1
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public |
Gene features only from the comprehensive set of gene anntotations including reference chromosomes, scaffoldings, assebly patches, and alternative loci. All other features have been removed. Data is specific to GENCODE Release 34 (Ensembl 100). Features include: gene.
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2025-03-25 |
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grch37-gene-only-features-gencode-v1
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public |
Gene features only from the comprehensive set of gene anntotations created on GRCh38 and mapped to GRCh37 by GENCODE (v34lift37). All other features have been removed. Some annotations were obtained from GENCODE v19 when mapping failed. Scaffoldings, assenbly patches, and alternative loci are NOT included. Features include: gene.
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2025-03-25 |
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grch37-gene-only-features-ensembl-v1
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public |
Gene features only from Ensembl gene sets. All other features have been removed. (Alignment based annotation using proteins, cDNA, RNA-seq, etc.). Features include: gene. Features are in GTF format.
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2025-03-25 |
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hg38-intron-features-gencode-v1
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public |
Intron features created from the comprehensive set of gene anntotations including reference chromosomes, scaffoldings, assebly patches, and alternative loci. Intron features for each transcripts have been added to the annotation set. All other features are removed. Data is specific to GENCODE Release 34 (Ensembl 100). Features include: intron. Remapped from Ensembl GRCh38 to UCSC hg38. (Scaffoldings wihtout UCSC matches are kept with Ensebml ids)
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2025-03-25 |
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hg38-gene-features-with-introns-gencode-v1
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public |
Comprehensive set of gene anntotations including reference chromosomes, scaffoldings, assebly patches, and alternative loci. Intron features for each transcripts have been added to the annotation set. Data is specific to GENCODE Release 34 (Ensembl 100). Features include: gene, transcript, exon, intron, CDS, UTR, start_codon, stop_codon, and Selenocysteine. Remapped from Ensembl GRCh38 to UCSC hg38. (Scaffoldings wihtout UCSC matches are kept with Ensebml ids)
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2025-03-25 |
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hg19-intron-features-gencode-v1
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public |
Intron features created from the comprehensive set of gene anntotations created on GRCh38 and mapped to GRCh37 by GENCODE (v34lift37). Intron features for each transcripts have been added to the annotation set. ll other features are removed. Some annotations were obtained from GENCODE v19 when mapping failed. Scaffoldings, assenbly patches, and alternative loci are NOT included. Features include: intron. Remapped from Ensembl GRCh37 to UCSC hg19
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2025-03-25 |
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hg19-gene-features-with-introns-gencode-v1
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public |
Comprehensive set of gene anntotations created on GRCh38 and mapped to GRCh37 by GENCODE (v34lift37). Intron features for each transcripts have been added to the annotation set. Some annotations were obtained from GENCODE v19 when mapping failed. Scaffoldings, assenbly patches, and alternative loci are NOT included. Features include: gene, transcript, exon, intron, CDS, UTR, start_codon, stop_codon, and Selenocysteine. Remapped from Ensembl GRCh37 to UCSC hg19
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2025-03-25 |
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grch38-intron-features-gencode-v1
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public |
Intron features created from the comprehensive set of gene anntotations including reference chromosomes, scaffoldings, assebly patches, and alternative loci. Intron features for each transcripts have been added to the annotation set. All other features are removed. Data is specific to GENCODE Release 34 (Ensembl 100). Features include: intron.
|
2025-03-25 |
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grch38-gene-features-with-introns-gencode-v1
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public |
Comprehensive set of gene anntotations including reference chromosomes, scaffoldings, assebly patches, and alternative loci. Intron features for each transcripts have been added to the annotation set. Data is specific to GENCODE Release 34 (Ensembl 100). Features include: gene, transcript, exon, intron, CDS, UTR, start_codon, stop_codon, and Selenocysteine.
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2025-03-25 |
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grch37-intron-features-gencode-v1
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public |
Intron features created from the comprehensive set of gene anntotations created on GRCh38 and mapped to GRCh37 by GENCODE (v34lift37). Intron features for each transcripts have been added to the annotation set. All other features are removed. Some annotations were obtained from GENCODE v19 when mapping failed. Scaffoldings, assenbly patches, and alternative loci are NOT included. Features include: intron.
|
2025-03-25 |
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grch37-gene-features-with-introns-gencode-v1
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public |
Comprehensive set of gene anntotations created on GRCh38 and mapped to GRCh37 by GENCODE (v34lift37). Intron features for each transcripts have been added to the annotation set. Some annotations were obtained from GENCODE v19 when mapping failed. Scaffoldings, assenbly patches, and alternative loci are NOT included. Features include: gene, transcript, exon, intron, CDS, UTR, start_codon, stop_codon, and Selenocysteine.
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2025-03-25 |
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hg38-intron-features-ensembl-v1
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public |
Intron features created from the Ensembl gene features, including all annotated transcripts, that make up the Ensembl gene sets. Intron features for each transcripts have been added to the annotation set. All other features are removed. (Alignment based annotation using proteins, cDNA, RNA-seq, etc.). Features include: intron. Features are in GTF format. Remapped from Ensembl GRCh38 to UCSC hg38
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2025-03-25 |
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hg38-gene-features-with-introns-ensembl-v1
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public |
Gene features, including all annotated transcripts, that make up the Ensembl gene sets. Intron features for each transcripts have been added to the annotation set. (Alignment based annotation using proteins, cDNA, RNA-seq, etc.). Features include: CDS, Selenocysteine, UTR, exon, gene, intron, start_codon, stop_codon, and transcript. Features are in GTF format. Remapped from Ensembl GRCh38 to UCSC hg38
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2025-03-25 |
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hg19-intron-features-ensembl-v1
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public |
Intron features created from the Ensembl gene features, including all annotated transcripts, that make up the Ensembl gene sets. Intron features for each transcripts have been added to the annotation set. All other features are removed. (Alignment based annotation using proteins, cDNA, RNA-seq, etc.). Features include: intron. Features are in GTF format. Remapped from Ensembl GRCh37 to UCSC hg19
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2025-03-25 |
