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ggd-genomics / packages

Package Name Access Summary Updated
hg19-evofold-ucsc-v1 public The evolutionary conserved mRNA secondary structure predictions hosted on UCSC. In bed format 2025-03-25
grch37-esp-variants-uw-v1 public The NHLBI Exome Sequencing Project (ESP) variants from the University of Washington. ESP6500SI. all snps and indels. (More Info: http://evs.gs.washington.edu/EVS/#tabs-7) 2025-03-25
hg38-repeatmasker-ucsc-v1 public RepeatMasker track from UCSC in bed format 2025-03-25
hg38-pfam-domains-ucsc-v1 public Pfam domain annotation in bed12 format. (From UCSC) 2025-03-25
hg38-gaps-ucsc-v1 public hg38 Assembly gaps from UCSC in bed format 2025-03-25
hg38-cpg-islands-ucsc-v1 public hg38 cpg islands from UCSC in bed format 2025-03-25
hg19-repeatmasker-ucsc-v1 public RepeatMasker track from UCSC in bed format 2025-03-25
hg19-phastcons-ucsc-v1 public phastCons scores for MSA of 99 genomes to hg19 2025-03-25
hg19-cpg-islands-ucsc-v1 public cpg islands from UCSC in bed format 2025-03-25
grch38-reference-genome-ensembl-v1 public The GRCh38 reference genome from Ensembl. Release 95. Primary Assembly file 2025-03-25
grch37-reference-genome-ensembl-v1 public The GRCh37 reference genome from Ensembl. Release 75. Primary Assembly file 2025-03-25
grch37-reference-genome-1000g-v1 public GRCh37 reference genome from 1000 genomes 2025-03-25
hg19-gaps-ucsc-v1 public Assembly gaps from UCSC in bed format 2025-03-25

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