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grch38-self-chain-high-identity-ucsc-v1

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High identity, >=90%, Self chain alignments of the human genome with an improved gap scoring system. Genomic coordinates are merged across all overlapping intervals, providing continuous high identity self chain repeat regions. Alignments point out areas of duplication within the human genome, with the exception of the pseudoautosomal regions on X and Y. From the Human Chained Self Alignemnts track on UCSC. Remapped from UCSC hg38 to Ensembl GRCh37

Installation

To install this package, run one of the following:

Conda
$conda install ggd-genomics::grch38-self-chain-high-identity-ucsc-v1

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Summary

High identity, >=90%, Self chain alignments of the human genome with an improved gap scoring system. Genomic coordinates are merged across all overlapping intervals, providing continuous high identity self chain repeat regions. Alignments point out areas of duplication within the human genome, with the exception of the pseudoautosomal regions on X and Y. From the Human Chained Self Alignemnts track on UCSC. Remapped from UCSC hg38 to Ensembl GRCh37

Last Updated

Dec 18, 2020 at 23:04

Total Downloads

20

Supported Platforms

noarch