hg38-hisat2
hisat2 (v2.0.1) reference with Ensembl release 78 exon and splicesite annotations Derived from NCBI set with HLA and decoy alternative alleles ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/technical/reference/GRCh38_reference_genome/ README.md has an in depth description of how this was created