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cgmlstfinder

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Core genome Multi-Locus Sequence Typing cgMLSTFinder runs KMA [1] against a chosen core genome MLST (cgMLST) database and outputs the detected alleles in a matrix file.

Installation

To install this package, run one of the following:

Conda
$conda install genomicepidemiology::cgmlstfinder

Usage Tracking

1.1.5
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Downloads (Last 6 months): 0

About

Summary

Core genome Multi-Locus Sequence Typing cgMLSTFinder runs KMA [1] against a chosen core genome MLST (cgMLST) database and outputs the detected alleles in a matrix file.

Last Updated

Jul 11, 2023 at 09:29

License

Apache-2.0

Total Downloads

50

Supported Platforms

noarch