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ecoevoinfo / packages

Package Name Access Summary Updated
resistnet public Package for optimising environmental resistance networks from genetic distances 2024-06-06
r-circular public Circular Statistics, from "Topics in circular Statistics" (2001) S. Rao Jammalamadaka and A. SenGupta, World Scientific. 2024-03-27
r-samc public Implements functions for working with absorbing Markov chains. The implementation is based on the framework described in "Toward a unified framework for connectivity that disentangles movement and mortality in space and time" by Fletcher et al. (2019) <doi:10.1111/ele.13333>, which applies them to spatial ecology. This framework incorporates both resistance and absorption with spatial absorbing Markov chains (SAMC) to provide several short-term and long-term predictions for metrics related to connectivity in landscapes. Despite the ecological context of the framework, this package can be used in any application of absorbing Markov chains. 2024-02-15
autostreamtree public A package for fitting genetic distances to spatial networks 2024-02-09
mantel public Python implementation of the Mantel test, a significance test of the correlation between two distance matrices 2023-12-06
geogenie public Package for optimising environmental resistance networks from genetic distances 2023-12-06

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