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dnachun / packages

Package Name Access Summary Updated
perl-gd public Perl interface to the gd2 graphics library 2025-03-25
perl-extutils-constant public generate XS code to import C header constants 2025-03-25
libgtextutils public Gordon Text utils Library 2025-03-25
polyfun public PolyFun (POLYgenic FUNctionally-informed fine-mapping) 2025-03-25
r-mrinstruments public Data objects for various sets of instruments 2025-03-25
r-topr public A collection of functions for visualizing,exploring and annotating genetic association results.Association results from multiple traits can be viewed simultaneously along with gene annotation, over the entire genome (Manhattan plot) or in the more detailed regional view. 2025-03-25
r-enshuman public Gene information from 'Ensembl' genome builds 'GRCh38.p14' and 'GRCh37.p13' to use with the 'topr' package. 2025-03-25
snpeff public Genetic variant annotation and effect prediction toolbox 2025-03-25
leafcutter_scripts public Alternative Splicing Quantification, Differential Splicing, Outlier Splicing Detection, and Splicing QTL Mapping - scripts 2025-03-25
r-tidytof public An R package for analyzing high-dimensional cytometry data using the tidyverse. 2025-03-25
bioconductor-flowcore public flowCore: Basic structures for flow cytometry data 2025-03-25
cassi public Genome-Wide Interaction Analysis Software 2025-03-25
r-feather public Read and write feather files, a lightweight binary columnar data store designed for maximum speed. 2025-03-25
bioconductor-rprotobuflib public C++ headers and static libraries of Protocol buffers 2025-03-25
fastlmmc public Factored Spectrally Transformed Linear Mixed Model 2025-03-25
fastlmm public Fast GWAS 2025-03-25
pysnptools public PySnpTools 2025-03-25
fastlmmclib public Fast GWAS 2025-03-25
elapsed public Elapsed time C library. 2025-03-25
cbgen public Python wrapper around a BGEN library 2025-03-25
r-hudson public This package creates mirrored Manhattan (Hudson) plots for *ome-wide association analyses, including, but not limited to, GWAS, PheWAS, and EWAS. 2025-03-25
bwa-mem2 public The next version of bwa-mem 2025-03-25
r-stylo public Supervised and unsupervised multivariate methods, supplemented by GUI and some visualizations, to perform various analyses in the field of computational stylistics, authorship attribution, etc. For further reference, see Eder et al. (2016), <https://journal.r-project.org/archive/2016/RJ-2016-007/index.html>. You are also encouraged to visit the Computational Stylistics Group's website <https://computationalstylistics.github.io/>, where a reasonable amount of information about the package and related projects are provided. 2025-03-25
r-crumblr public Count ratio uncertainty modeling base linear regression 2025-03-25
pear public paired-end read merger 2025-03-25

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