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dnachun / packages

Package Name Access Summary Updated
vde public Ethernet compliant virtual network 2025-03-25
ncmpcpp public Ncurses-based client for the Music Player Daemon 2025-03-25
taglib public Audio metadata library 2025-03-25
libid3tag public ID3 tag manipulation library 2025-03-25
mpd public Library for MPD in the C, C++, and Objective-C languages 2025-03-25
libupnp public Portable UPnP development kit 2025-03-25
libshout public Data and connectivity library for the icecast server 2025-03-25
speex public Speex: A Free Codec For Free Speech 2025-03-25
libsamplerate public Library for sample rate conversion of audio data 2025-03-25
libnfs public Cross-platform Audio Library 2025-03-25
libmpdclient public Library for MPD in the C, C++, and Objective-C languages 2025-03-25
libao public Cross-platform Audio Library 2025-03-25
faad2 public ISO AAC audio decoder 2025-03-25
sdpr public Method to compute polygenic risk score (PRS) from summary statistics 2025-03-25
r-lassosum public LASSO with summary statistics and a reference panel 2025-03-25
r-susier public Implements methods for variable selection in linear regression based on the "Sum of Single Effects" (SuSiE) model, as described in Wang et al (2020) <DOI:10.1101/501114>. These methods provide simple summaries, called "Credible Sets", for accurately quantifying uncertainty in which variables should be selected. The methods are motivated by genetic fine-mapping applications, and are particularly well-suited to settings where variables are highly correlated and detectable effects are sparse. The fitting algorithm, a Bayesian analogue of stepwise selection methods called "Iterative Bayesian Stepwise Selection" (IBSS), is simple and fast, allowing the SuSiE model be fit to large data sets (thousands of samples and hundreds of thousands of variables). 2025-03-25
ddqc public No Summary 2025-03-25
cellbender public A software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data 2025-03-25
r-mbsp public Gibbs sampler for fitting multivariate Bayesian linear regression with shrinkage priors (MBSP), using the three parameter beta normal family. The method is described in Bai and Ghosh (2018) <doi:10.1016/j.jmva.2018.04.010>. 2025-03-25
r-mr.mash.alpha public Provides an implementation of methods for multivariate multiple regression with adaptive shrinkage priors. 2025-03-25
perl-switch public A switch statement for Perl, do not use if you can use given/when 2025-03-25
gregor public GREGOR (Genomic Regulatory Elements and Gwas Overlap algoRithm) is a tool to test for enrichment of an input list of trait-associated index SNPs in experimentally annotated regulatory domains. 2025-03-25
erg public Statically typed language that can deeply improve the Python ecosystem 2025-03-25
rb-method_source public retrieve the sourcecode for a method 2025-03-25
rb-coderay public Fast and easy syntax highlighting for selected languages, written in Ruby. Comes with RedCloth integration and LOC counter. 2025-03-25
pry public Pry is a runtime developer console and IRB alternative with powerful introspection capabilities. 2025-03-25
perl-syntax-highlight-perl-improved public Highlighting of Perl Syntactical Structures 2025-03-25
perl-rlib public manipulate @INC at compile time with relative paths 2025-03-25
perl-lwp-mediatypes public guess media type for a file or a URL 2025-03-25
perl-io-html public Open an HTML file with automatic charset detection 2025-03-25
perl-http-message public HTTP style message (base class) 2025-03-25
perl-http-date public HTTP::Date - date conversion routines 2025-03-25
perl-html-tagset public data tables useful in parsing HTML 2025-03-25
perl-encode-locale public Determine the locale encoding 2025-03-25
perl-devel-trepan public Modular Perl Debugger (akin to Python "Trepanning" Debuggers). 2025-03-25
perl-config-autoconf public A module to implement some of AutoConf macros in pure perl. 2025-03-25
perl-array-columnize public Format an Array as an Array of String aligned in columns. 2025-03-25
perl-marpa-r2 public Release 2 of Marpa 2025-03-25
perl-html-parser public HTML parser class 2025-03-25
perl-devel-callsite public Get caller return OP address and Perl interpreter context 2025-03-25
rubyfmt public Ruby autoformatter 2025-03-25
ttags public Generate ctags using Tree Sitter 2025-03-25
sh public A shell parser, formatter, and interpreter with bash support; includes shfmt 2025-03-25
joker public Small Clojure interpreter, linter and formatter. 2025-03-25
rb-sorbet-runtime public Sorbet's runtime type checking component 2025-03-25
ruby-lsp public An opinionated language server for Ruby 2025-03-25
rb-prism public Prism Ruby parser 2025-03-25
reek public Reek is a tool that examines Ruby classes, modules and methods and reports any code smells it finds. 2025-03-25
kwalify public Kwalify is a parser, schema validator, and data binding tool for YAML and JSON. 2025-03-25
tree-sitter-lsp public a library to create language servers 2025-03-25

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