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dnachun / packages

Package Name Access Summary Updated
libsvg public SVG rendering library using Cairo 2025-03-25
spice-protocol public Headers for SPICE protocol 2025-03-25
vde public Ethernet compliant virtual network 2025-03-25
ncmpcpp public Ncurses-based client for the Music Player Daemon 2025-03-25
taglib public Audio metadata library 2025-03-25
libid3tag public ID3 tag manipulation library 2025-03-25
mpd public Library for MPD in the C, C++, and Objective-C languages 2025-03-25
libupnp public Portable UPnP development kit 2025-03-25
libshout public Data and connectivity library for the icecast server 2025-03-25
speex public Speex: A Free Codec For Free Speech 2025-03-25
libsamplerate public Library for sample rate conversion of audio data 2025-03-25
libnfs public Cross-platform Audio Library 2025-03-25
libmpdclient public Library for MPD in the C, C++, and Objective-C languages 2025-03-25
libao public Cross-platform Audio Library 2025-03-25
faad2 public ISO AAC audio decoder 2025-03-25
sdpr public Method to compute polygenic risk score (PRS) from summary statistics 2025-03-25
r-lassosum public LASSO with summary statistics and a reference panel 2025-03-25
r-susier public Implements methods for variable selection in linear regression based on the "Sum of Single Effects" (SuSiE) model, as described in Wang et al (2020) <DOI:10.1101/501114>. These methods provide simple summaries, called "Credible Sets", for accurately quantifying uncertainty in which variables should be selected. The methods are motivated by genetic fine-mapping applications, and are particularly well-suited to settings where variables are highly correlated and detectable effects are sparse. The fitting algorithm, a Bayesian analogue of stepwise selection methods called "Iterative Bayesian Stepwise Selection" (IBSS), is simple and fast, allowing the SuSiE model be fit to large data sets (thousands of samples and hundreds of thousands of variables). 2025-03-25
ddqc public No Summary 2025-03-25
cellbender public A software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data 2025-03-25
r-mbsp public Gibbs sampler for fitting multivariate Bayesian linear regression with shrinkage priors (MBSP), using the three parameter beta normal family. The method is described in Bai and Ghosh (2018) <doi:10.1016/j.jmva.2018.04.010>. 2025-03-25
r-mr.mash.alpha public Provides an implementation of methods for multivariate multiple regression with adaptive shrinkage priors. 2025-03-25
perl-switch public A switch statement for Perl, do not use if you can use given/when 2025-03-25
gregor public GREGOR (Genomic Regulatory Elements and Gwas Overlap algoRithm) is a tool to test for enrichment of an input list of trait-associated index SNPs in experimentally annotated regulatory domains. 2025-03-25
erg public Statically typed language that can deeply improve the Python ecosystem 2025-03-25

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