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dnachun / packages

Package Name Access Summary Updated
evolocity public Evolutionary velocity with protein language models 2025-03-25
retroseq public Deep learning tool for identifying retrotransposons 2025-03-25
perl-parallel-forkmanager public A simple parallel processing fork manager 2025-03-25
retronet public Deep learning tool for identifying retrotransposons 2025-03-25
seg public Tool for identifying and masking segments of low compositional complexity in amino acid sequences 2025-03-25
exonerate public Exonerate - A generic tool for pairwise sequence comparison / alignment 2025-03-25
arcsv public No Summary 2025-03-25
structural-evolution public Unsupervised evolution of protein and antibody complexes with a structure-informed language model 2025-03-25
openfold public No Summary 2025-03-25
esm public No Summary 2025-03-25
fish-lsp public LSP implementation for the fish shell language 2025-03-25
angular-language-server public Language Server Protocol (LSP) implementation of the Angular Language Service. 2025-03-25
julia public A high-performance dynamic programming language for data science 2025-03-25
zls public A Zig language server supporting Zig developers with features like autocomplete and goto definition 2025-03-25
code-server public Run VS Code on a remote server. 2025-03-25
clojurescript public Clojure to JS compiler 2025-03-25
fnlfmt public Format your Fennel! 2025-03-25
fennel-ls public Provides intelligent editing features for fennel files. 2025-03-25
fennel public Lua Lisp Language 2025-03-25
wgbs_tools public No Summary 2025-03-25
r-doubletdecon public A tool for removing doublets from single-cell RNA-seq data 2025-03-25
r-shinydirectoryinput public An shiny input widget for selecting directories 2025-03-25
r-chron public Provides chronological objects which can handle dates and times. 2025-03-25
phenograph public Graph-based clustering for high-dimensional single-cell data 2025-03-25
doubletdetection public Method to detect and enable removal of doublets from single-cell RNA-sequencing. 2025-03-25
demuxalot public Scalable and reliable demulitplexing for single-cell RNA sequencing. 2025-03-25
macs2 public Model Based Analysis for ChIP-Seq data 2025-03-25
lda public Topic modeling with latent Dirichlet allocation 2025-03-25
pyscenic public No Summary 2025-03-25
scenicplus public SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) and single-cell chromatin accessibility (scATAC-seq) data. 2025-03-25
pycistopic public the blessed package to manage your versions by scm tags 2025-03-25
pycistarget public the blessed package to manage your versions by scm tags 2025-03-25
multiprocessing_on_dill public A friendly fork of multiprocessing which uses dill instead of pickle 2025-03-25
loomxpy public Python package (compatible with SCope) to create .loom files and extend them with other data e.g.: SCENIC regulons 2025-03-25
loompy public Work with Loom files for single-cell RNA-seq data 2025-03-25
jekyll public Jekyll is a blog-aware static site generator in Ruby 2025-03-25
rb-jekyll-sass-converter public A Sass converter for Jekyll. 2025-03-25
rb-sassc public Use libsass with Ruby! 2025-03-25
darcs public a distributed, interactive, smart revision control system 2025-03-25
textlsp public Language server for text spell and grammar check with various tools. 2025-03-25
czplib public Chaolin Zhang lab perl library 2025-03-25
erb_lint public ERB Linter tool. 2025-03-25
rb-better_html public Better HTML for Rails. Provides sane html helpers that make it easier to do the right thing. 2025-03-25
rb-temple public Template compilation framework in Ruby 2025-03-25
rb-sysexits public Exit status codes for Ruby system programs. 2025-03-25
rb-haml public An elegant, structured (X)HTML/XML templating engine. 2025-03-25
haml_lint public Tool for writing clean and consistent HAML 2025-03-25
rb-smart_properties public SmartProperties are a more flexible and feature-rich alternative to traditional Ruby accessors. 2025-03-25
rb-rails-html-sanitizer public HTML sanitization for Rails applications 2025-03-25
rb-rails-dom-testing public This gem can compare doms and assert certain elements exists in doms using Nokogiri. 2025-03-25

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