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dnachun / packages

Package Name Access Summary Updated
cflow public Generate call graphs from C code 2025-03-25
mc public Terminal-based visual file manager 2025-03-25
cppi public Indent C preprocessor directives to reflect their nesting 2025-03-25
gcal public Display hybrid and proleptic Julian and Gregorian calendar sheets 2025-03-25
libextractor public Library to extract meta data from files 2025-03-25
libpaper public Library for handling paper characteristics 2025-03-25
dxpy public DNAnexus Platform API bindings for Python 2025-03-25
cadd-sv public No Summary 2025-03-25
cadd-scripts public No Summary 2025-03-25
synthego-ice public Synthego - Inference of CRISPR Edits (ICE) 2025-03-25
r-cytotrace2 public CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data. 2025-03-25
r-hiclimr public A tool for Hierarchical Climate Regionalization applicable to any correlation-based clustering. It adds several features and a new clustering method (called, 'regional' linkage) to hierarchical clustering in R ('hclust' function in 'stats' library): data regridding, coarsening spatial resolution, geographic masking, contiguity-constrained clustering, data filtering by mean and/or variance thresholds, data preprocessing (detrending, standardization, and PCA), faster correlation function with preliminary big data support, different clustering methods, hybrid hierarchical clustering, multivariate clustering (MVC), cluster validation, visualization of regionalization results, and exporting region map and mean timeseries into NetCDF-4 file. 2025-03-25
tectonic public A modernized, complete, standalone TeX/LaTeX engine. 2025-03-25
pansyn public A comprehensive software tool for genome synteny analysis. 2025-03-25
bioconductor-pwalign public Perform pairwise sequence alignments 2025-03-25
mcl public MCL - a cluster algorithm for graphs. 2025-03-25
bioconductor-biovizbase public Basic graphic utilities for visualization of genomic data. 2025-03-25
blast public BLAST+ is a new suite of BLAST tools that utilizes the NCBI C++ Toolkit. 2025-03-25
rpsbproc public RpsbProc, the post-RPSBLAST Processing Utility. 2025-03-25
synphoni public Watershed-SV extends Watershed to model the impact of rare SVs 2025-03-25
biber public Backend processor for BibLaTeX 2025-03-25
perl-unicode-collate public Unicode Collation Algorithm 2025-03-25
perl-unicode-linebreak public Perl Unicode module 2025-03-25
perl-perlio-utf8_strict public Fast and correct UTF-8 IO 2025-03-25
perl-xml-libxslt public Interface to GNOME libxslt library 2025-03-25
perl-sort-key public the fastest way to sort anything in Perl 2025-03-25
perl-text-roman public Allows conversion between Roman and Arabic algarisms. 2025-03-25
perl-text-csv_xs public Comma-Separated Values manipulation routines 2025-03-25
perl-mozilla-ca public Mozilla's CA cert bundle in PEM format 2025-03-25
perl-business-ismn public work with International Standard Music Numbers 2025-03-25
perl-tie-cycle public Cycle through a list of values via a scalar. 2025-03-25
perl-business-issn public Perl extension for International Standard Serial Numbers 2025-03-25
perl-data-compare public compare perl data structures 2025-03-25
perl-file-find-rule public command line wrapper to File::Find::Rule 2025-03-25
perl-data-uniqid public Perl extension for simple genrating of unique id's 2025-03-25
perl-datetime-calendar-julian public DateTime object in the Julian calendar 2025-03-25
perl-encode-eucjpascii public eucJP-ascii - An eucJP-open mapping 2025-03-25
perl-encode-hanextra public Extra sets of Chinese encodings 2025-03-25
perl-encode-jis2k public JIS X 0212 (aka JIS 2000) Encodings 2025-03-25
perl-file-slurper public A simple, sane and efficient module to slurp a file 2025-03-25
perl-io-string public Emulate file interface for in-core strings 2025-03-25
perl-ipc-run3 public run a subprocess with input/output redirection 2025-03-25
perl-lingua-translit public transliterates text between writing systems 2025-03-25
perl-list-allutils public Combines List::Util, List::SomeUtils and List::UtilsBy in one bite-sized package 2025-03-25
perl-list-utilsby public higher-order list utility functions 2025-03-25
perl-lwp-protocol-https public Provide https support for LWP::UserAgent 2025-03-25
perl-libwww-perl public The World-Wide Web library for Perl 2025-03-25
perl-http-cookiejar public A minimalist HTTP user agent cookie jar 2025-03-25
perl-net-http public Low-level HTTP connection (client) 2025-03-25
perl-file-listing public Parse directory listing 2025-03-25

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