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r-topr
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public |
A collection of functions for visualizing,exploring and annotating genetic association results.Association results from multiple traits can be viewed simultaneously along with gene annotation, over the entire genome (Manhattan plot) or in the more detailed regional view.
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2025-03-25 |
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r-enshuman
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public |
Gene information from 'Ensembl' genome builds 'GRCh38.p14' and 'GRCh37.p13' to use with the 'topr' package.
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2025-03-25 |
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snpeff
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public |
Genetic variant annotation and effect prediction toolbox
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2025-03-25 |
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leafcutter_scripts
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public |
Alternative Splicing Quantification, Differential Splicing, Outlier Splicing Detection, and Splicing QTL Mapping - scripts
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2025-03-25 |
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r-tidytof
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public |
An R package for analyzing high-dimensional cytometry data using the tidyverse.
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2025-03-25 |
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bioconductor-flowcore
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public |
flowCore: Basic structures for flow cytometry data
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2025-03-25 |
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cassi
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public |
Genome-Wide Interaction Analysis Software
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2025-03-25 |
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r-feather
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public |
Read and write feather files, a lightweight binary columnar data store designed for maximum speed.
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2025-03-25 |
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bioconductor-rprotobuflib
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public |
C++ headers and static libraries of Protocol buffers
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2025-03-25 |
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fastlmmc
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public |
Factored Spectrally Transformed Linear Mixed Model
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2025-03-25 |
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bgen-py
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public |
Package for loading data from bgen files
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2025-03-25 |
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fastlmm
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public |
Fast GWAS
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2025-03-25 |
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pysnptools
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public |
PySnpTools
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2025-03-25 |
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fastlmmclib
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public |
Fast GWAS
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2025-03-25 |
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elapsed
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public |
Elapsed time C library.
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2025-03-25 |
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cbgen
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public |
Python wrapper around a BGEN library
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2025-03-25 |
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r-hudson
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public |
This package creates mirrored Manhattan (Hudson) plots for *ome-wide association analyses, including, but not limited to, GWAS, PheWAS, and EWAS.
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2025-03-25 |
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bwa-mem2
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public |
The next version of bwa-mem
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2025-03-25 |
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r-stylo
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public |
Supervised and unsupervised multivariate methods, supplemented by GUI and some visualizations, to perform various analyses in the field of computational stylistics, authorship attribution, etc. For further reference, see Eder et al. (2016), <https://journal.r-project.org/archive/2016/RJ-2016-007/index.html>. You are also encouraged to visit the Computational Stylistics Group's website <https://computationalstylistics.github.io/>, where a reasonable amount of information about the package and related projects are provided.
|
2025-03-25 |
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r-crumblr
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public |
Count ratio uncertainty modeling base linear regression
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2025-03-25 |
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pear
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public |
paired-end read merger
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2025-03-25 |
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libpopcnt
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public |
Fast C/C++ bit population count library
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2025-03-25 |
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gem3-mapper
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public |
The GEM read mapper (v3).
|
2025-03-25 |
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bs_call
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public |
DNA methylation and variant Caller for Bisulfite Sequencing Data.
|
2025-03-25 |
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perl-net-ssleay
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public |
Perl extension for using OpenSSL
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2025-03-25 |
