dnachun
by Daniel Nachun
Postdoc in computational genomics
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Packages
| Name | Latest Version | Summary | Updated | License |
|---|
| r-colocboost | 1.0.9 | A multi-task learning approach to variable selection regression with highly correlated predictors and sparse effects, based on frequentist statistical inference. It provides statistical evidence to identify which subsets of predictors have non-zero effects on which subsets of response variables, motivated and designed for colocalization analysis across genome-wide association studies (GWAS) and quantitative trait loci (QTL) studies. The ColocBoost model is described in Cao et. al. (2025) <doi:10.1101/2025.04.17.25326042>. | Jun 8, 2026 | MIT |
| r-fsusier | 0.3.0 | Draft package for "Sum of Single Functions" method. | Apr 3, 2025 | GPL-3.0-or-later |
| r-l0learn | 2.1.0 | Highly optimized toolkit for approximately solving L0-regularized learning problems (a.k.a. best subset selection). The algorithms are based on coordinate descent and local combinatorial search. | Jan 27, 2026 | MIT |
| gtex-pipeline-phaser | gtex_v10 | GTEx & TOPMed data production and analysis pipelines - phASER wrapper | Mar 31, 2026 | LicenseRef-OTHER |
| r-smashr | 1.2_7 | An R package for smoothing & signal denoising using adaptive shrinkage. | Apr 3, 2025 | GPL-3.0-or-later |
| perl-uri | 5.17 | Uniform Resource Identifiers (absolute and relative) | Mar 25, 2025 | GPL-1.0-or-later OR Artistic-1.0-Perl |
| perl-try-tiny | 0.31 | Minimal try/catch with proper preservation of $@ | Mar 25, 2025 | MIT |
| r-decor | 1.0.2 | Retrieves code comment decorations for C++ languages of the form '\\ [[xyz]]', which are used for automated wrapping of C++ functions. | Apr 20, 2026 | MIT |
| perl-role-tiny | 2.002004 | Roles: a nouvelle cuisine portion size slice of Moose | Mar 25, 2025 | GPL-1.0-or-later OR Artistic-1.0-Perl |
| perl-module-build | 0.4234 | Build and install Perl modules | Mar 25, 2025 | GPL-1.0-or-later OR Artistic-1.0-Perl |
| perl-module-runtime | 0.016 | runtime module handling | Mar 25, 2025 | GPL-1.0-or-later OR Artistic-1.0-Perl |
| r-mr.mashr | 0.3.44 | Provides an implementation of methods for multivariate multiple regression with adaptive shrinkage priors. | Mar 4, 2026 | LicenseRef-Other |
| perl-module-implementation | 0.09 | Loads one of several alternate underlying implementations for a module | Mar 25, 2025 | Artistic-2.0 |
| perl-package-stash | 0.40 | Routines for manipulating stashes | Mar 25, 2025 | GPL-1.0-or-later OR Artistic-1.0-Perl |
| perl-devel-stacktrace | 2.04 | An object representing a stack trace | Mar 25, 2025 | Artistic-2.0 |
| perl-class-data-inheritable | 0.09 | Inheritable, overridable class data | Mar 25, 2025 | GPL-1.0-or-later OR Artistic-1.0-Perl |
| perl-mro-compat | 0.15 | mro::* interface compatibility for Perls < 5.9.5 | Mar 25, 2025 | GPL-1.0-or-later OR Artistic-1.0-Perl |
| perl-namespace-clean | 0.27 | Keep imports and functions out of your namespace | Mar 25, 2025 | GPL-1.0-or-later OR Artistic-1.0-Perl |
| perl-sub-quote | 2.006006 | Efficient generation of subroutines via string eval | Mar 25, 2025 | GPL-1.0-or-later OR Artistic-1.0-Perl |
| perl-ipc-system-simple | 1.30 | Run commands simply, with detailed diagnostics | Mar 25, 2025 | GPL-1.0-or-later OR Artistic-1.0-Perl |
| perl-sub-exporter-progressive | 0.001013 | Only use Sub::Exporter if you need it | Mar 25, 2025 | GPL-1.0-or-later OR Artistic-1.0-Perl |
| perl-dist-checkconflicts | 0.11 | declare version conflicts for your dist | Mar 25, 2025 | GPL-1.0-or-later OR Artistic-1.0-Perl |
| perl-io-string | 1.8 | Emulate file interface for in-core strings | Mar 25, 2025 | Artistic-1.0-Perl OR GPL-1.0-or-later |
| perl-http-cookiejar | 0.14 | A minimalist HTTP user agent cookie jar | Mar 25, 2025 | Apache-2.0 |
| perl-http-cookies | 6.11 | HTTP cookie jars | Mar 25, 2025 | Artistic-1.0-Perl OR GPL-1.0-or-later |