| Package Name | Access | Summary | Updated |
|---|---|---|---|
| r-mrmix | public | Mendelian randomization using mixture models | 2025-03-25 |
| r-hdl | public | High definition likelihood | 2025-03-25 |
| oil | public | Bash-compatible Unix shell with more consistent syntax and semantics | 2025-03-25 |
| r-plink2r | public | R package to read in plink files | 2025-03-25 |
| r-r2bglims | public | R wrapper for a Java Bayesian GLM variable selection package | 2025-03-25 |
| fusion_twas | public | Suite of tools for performing transcriptome-wide and regulome-wide association studies | 2025-03-25 |
| dpr | public | Non-parametric genetic prediction of complex traits with latent Dirichlet process regression models | 2025-03-25 |
| tigar | public | Transcriptome-Integrated Genetic Association Resource | 2025-03-25 |
| metaxcan | public | Set of tools to integrate genomic information of biological mechanisms with complex traits | 2025-03-25 |
| torus | public | Tool for QTL discovery utilizing genomic annotations | 2025-03-25 |
| ptwas | public | Probabilistic Transcriptome-wide Association Analysis | 2025-03-25 |
| paintor | public | Tool for integration of functional and association data in fine-mapping studies | 2025-03-25 |
| gambit | public | A C++ tool for Gene-based Analysis with oMniBus, Integrative Tests | 2025-03-25 |
| fastenloc | public | Fast enrichment estimation aided colocalization analysis | 2025-03-25 |
| dap-g | public | Suite of statistical methods to perform genetic association analysis integrating genomic annotations | 2025-03-25 |
| caviarbf | public | Statistical framework for identifying causal variants | 2025-03-25 |
| caviar | public | Statistical framework for identifying causal variants | 2025-03-25 |
| osca | public | Tool for the analysis of complex traits using multi-omics data | 2025-03-25 |
| fastqtl | public | Fast and efficient QTL mapper for molecular phenotypes | 2025-03-25 |
| qtltools | public | Tool set for molecular QTL discovery and analysis | 2025-03-25 |
| r-base-rmath | public | R is a free software environment for statistical computing and graphics. | 2025-03-25 |
| sanity | public | Filtering of Poison noise on a single-cell RNA-seq UMI count matrix | 2025-03-25 |
| smr | public | Summary-data-based Mendelian Randomization | 2025-03-25 |
| gctb | public | A tool for Genome-wide Complex Trait Bayesian analysis | 2025-03-25 |
| rnaseqc | public | Efficient RNA-seq quality control and quantification for large cohorts | 2025-03-25 |
