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dnachun / packages

Package Name Access Summary Updated
luaformatter public Code formatter for Lua 2025-03-25
kalker public Full-featured calculator with math syntax 2025-03-25
gpg-tui public Manage your GnuPG keys with ease! 2025-03-25
git-extras public Small git utilities 2025-03-25
gccdiag public Utility to get GCC diagnostics for a file, with flags from compilation database 2025-03-25
fastmod public Fast partial replacement for the codemod tool 2025-03-25
duc public Suite of tools for inspecting disk usage 2025-03-25
mujs public Embeddable Javascript interpreter 2025-03-25
r-gwasvcf public Reading, querying and writing GWAS summary data in VCF format 2025-03-25
r-mr.ldp public Two-sample Mendelian randomization accounting for linkage disequilibrium and horizontal pleiotropy 2025-03-25
r-bwmr public Bayesian Weighted Mendelian Randomization 2025-03-25
r-genetics.binaries public Binaries for Tools Used in Genetics in an R Package 2025-03-25
diff-so-fancy public Good-lookin' diffs with diff-highlight and more 2025-03-25
nsh public Fish-like, POSIX-compatible shell 2025-03-25
nomino public Batch rename utility 2025-03-25
neural-admixture public Rapid population clustering with autoencoders 2025-03-25
gnomix public A fast, scalable, and accurate local ancestry method 2025-03-25
entr public Run arbitrary commands when files change 2025-03-25
yadm public Yet Another Dotfiles Manager 2025-03-25
r-cellchat public R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics 2025-03-25
r-nmf public Provides a framework to perform Non-negative Matrix Factorization (NMF). The package implements a set of already published algorithms and seeding methods, and provides a framework to test, develop and plug new/custom algorithms. Most of the built-in algorithms have been optimized in C++, and the main interface function provides an easy way of performing parallel computations on multicore machines. 2025-03-25
otters public Omnibus Transcriptome Test using Expression Reference Summary data 2025-03-25
bgw-twas public Bayesian Genome-wide (BGW) TWAS 2025-03-25
tmux-xpanes public Ultimate terminal divider powered by tmux 2025-03-25
tensorqtl public GPU-accelerated QTL mapper 2025-03-25
metal public Tool for the meta-analysis of genome-wide association studies 2025-03-25
qtl public Utilities for analyzing and visualizing QTL data 2025-03-25
r-colorout public Colorize R Output on Terminal Emulators 2025-03-25
r-watershedr public Unsupervised probabilistic framework for identifying functional effects of rare variants 2025-03-25
chromocombine public Tool to help manage the large number of files generated when running ChromoPainter 2025-03-25
chromopainter public Tool for finding haplotypes in sequence data 2025-03-25
finestructure public Fast and powerful algorithm for identifying population structure using dense sequencing data 2025-03-25
hstr public Bash and zsh history suggest box 2025-03-25
r-flashr public Empirical Bayes Matrix Factorization 2025-03-25
r-cause public Causal Analysis Using Summary Effect Estimates 2025-03-25
r-omr public Omnigenic Mendelian Randomization 2025-03-25
r-mraid public Mendelian Randomization with Automated Instrument Determination 2025-03-25
r-twosamplemr public Two Sample MR Functions and Interface to MR Base Database 2025-03-25
r-radialmr public Mendelian randomization via radial regression 2025-03-25
r-pmr public Probabilistic two sample mendelian randomization 2025-03-25
r-pdsce public Compute and tune some positive definite and sparse covariance estimators. 2025-03-25
r-mrraps public Robust statistical inference for Mendelian randomization with many weak instruments 2025-03-25
r-mrpresso public Mendelian Randomization Pleiotropy RESidual Sum and Outlier 2025-03-25
r-mrmix public Mendelian randomization using mixture models 2025-03-25
r-hdl public High definition likelihood 2025-03-25
oil public Bash-compatible Unix shell with more consistent syntax and semantics 2025-03-25
r-plink2r public R package to read in plink files 2025-03-25
r-r2bglims public R wrapper for a Java Bayesian GLM variable selection package 2025-03-25
fusion_twas public Suite of tools for performing transcriptome-wide and regulome-wide association studies 2025-03-25
dpr public Non-parametric genetic prediction of complex traits with latent Dirichlet process regression models 2025-03-25

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