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dnachun / packages / r-syntenyplotter 1.0.0

Genome Synteny Visualization

Installers

  • noarch v1.0.0

conda install

To install this package run one of the following:
conda install dnachun::r-syntenyplotter

Description

Draw syntenic relationships between genome assemblies. There are 3 functions which take a tab delimited file containing alignment data for syntenic blocks between genomes to produce either a linear alignment plot, an evolution highway style plot, or a painted ideogram representing syntenic relationships. There is also a function to convert alignment data in the DESCHRAMBLER/inferCAR format to the required data structure.


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