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taxibgc

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Taxonomy-guided Identification of Biosynthetic Gene Clusters

Installation

To install this package, run one of the following:

Conda
$conda install danielchang2002::taxibgc

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Description

TaxiBGC (Taxonomy-guided Identification of Biosynthetic Gene Clusters) is a computational pipeline for predicting experimentally characterized Biosynthetic Gene Clusters (BGCs) and their known secondary metabolites (SMs) (also called natural products) from shotgun metagenomic sequencing data.

If you use TaxiBGC, please cite: TaxiBGC: a Taxonomy-guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Secondary Metabolite Production Potential in Metagenomes. Gupta et al. mSystems (2022).

About

Summary

Taxonomy-guided Identification of Biosynthetic Gene Clusters

Last Updated

Nov 8, 2022 at 02:43

License

MIT

Total Downloads

376

Supported Platforms

linux-64
macOS-64