| Package Name | Access | Summary | Updated |
|---|---|---|---|
| r-argparse | public | No Summary | 2025-03-25 |
| sratoolkit | public | The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives. | 2025-03-25 |
| discover | public | Test discovery for unittest. Backported from Python 2.7 for Python 2.4+ | 2025-03-25 |
| python-wget | public | pure python download utility | 2025-03-25 |
| wget | public | pure python download utility | 2025-03-25 |
| ucsc-catdir | public | concatenate files in directory to stdout. | 2025-03-25 |
| functools32 | public | Backport of the functools module from Python 3.2.3 for use on 2.7 and PyPy. | 2025-03-25 |
| vcversioner | public | Use version control tags to discover version numbers | 2025-03-25 |
| ucsc-bedtobigbed | public | Convert bed file to bigBed. (BigBed version: 4) | 2025-03-25 |
| ucsc-fetchchromsizes | public | used to fetch chrom.sizes information from UCSC | 2025-03-25 |
| crossmap | public | Convert genomic coordiates between assemblies | 2025-03-25 |
| ucsc-bigbedtobed | public | Convert from bigBed to ascii bed format. | 2025-03-25 |
| ucsc-bedgraphtobigwig | public | Convert a bedGraph file to bigWig format. | 2025-03-25 |
| ucsc-wigtobigwig | public | Convert ascii format wig file (in fixedStep, variableStep | 2025-03-25 |
| bedgraphtobigwig | None | No Summary | 2025-03-25 |
| hubward | None | No Summary | 2025-03-25 |
| sh | None | Python subprocess interface | 2025-03-25 |
| trackhub | None | \nCreate and manage UCSC track hubs from Python\n | 2025-03-25 |
| pyaml | None | PyYAML-based module to produce pretty and readable YAML-serialized data | 2025-03-25 |
| bleach | None | An easy whitelist-based HTML-sanitizing tool. | 2025-03-25 |
| bedtobigbed | None | No Summary | 2025-03-25 |
| tabix | None | No Summary | 2025-03-25 |
| pysam | None | No Summary | 2025-03-25 |
| bedtools | None | A powerful toolset for genome arithmetic. | 2025-03-25 |
| pybedtools | None | No Summary | 2025-03-25 |
