servalcat
Structure refinement and validation for crystallography and single particle analysis
Structure refinement and validation for crystallography and single particle analysis
To install this package, run one of the following:
Structure refinement and validation for crystallography and single particle analysis.
Servalcat implements pipelines that use Refmac5:
- servalcat refine_spa: cryo-EM SPA refinement pipeline
- servalcat refine_cx: small molecule crystallography
and a Refmac5 controller
- refmacat: behaves as Refmac, but uses GEMMI for restraint generation instead of MAKECIF
Now “No Refmac5” refinement programs have been actively developed:
- servalcat refine_geom: geometry optimization
- servalcat refine_spa_norefmac: "No Refmac" version of refine_spa
- servalcat refine_xtal_norefmac: crystallographic refinement
Also, it has several utility commands: servalcat util.
Summary
Structure refinement and validation for crystallography and single particle analysis
Last Updated
Jan 8, 2026 at 10:11
License
MPL-2.0
Total Downloads
1.8K
Supported Platforms
GitHub Repository
https://github.com/keitaroyam/servalcatDocumentation
https://servalcat.readthedocs.io/en/latest